Evidence map›Paper›PMID 28972970›Full record

ArticlePLoS computational biology2017

Signatures of criticality arise from random subsampling in simple population models.

Marcel Nonnenmacher, Christian Behrens, Philipp Berens, Matthias Bethge, Jakob H Macke

Erratum issuedAbstract read
In one paragraph

Article in PLoS computational biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
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  9. Review
  10. Optimal Encoding in Stochastic Latent-Variable Models.Entropy (Basel, Switzerland) · 2020
    Article
  11. Article
  12. Article
  13. Article
  14. Issues in data expansion in understanding criticality in biological systems.The European physical journal. E, Soft matter · 2018
    Article
  15. Article
  16. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Marcel NonnenmacherResearch Center caesar, an associate of the Max Planck Society, Bonn, Germany.ORCID http://orcid.org/0000-0001-6044-6627
Christian BehrensBernstein Center for Computational Neuroscience, Tübingen, Germany.ORCID http://orcid.org/0000-0003-3623-352X
Philipp BerensBernstein Center for Computational Neuroscience, Tübingen, Germany.ORCID http://orcid.org/0000-0002-0199-4727
Matthias BethgeMax Planck Institute for Biological Cybernetics, Tübingen, Germany.
Jakob H MackeResearch Center caesar, an associate of the Max Planck Society, Bonn, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The rise of large-scale recordings of neuronal activity has fueled the hope to gain new insights into the collective activity of neural ensembles. How can one link the statistics of neural population activity to underlying principles and theories? One attempt to interpret such data builds upon analogies to the behaviour of collective systems in statistical physics. Divergence of the specific heat-a measure of population statistics derived from thermodynamics-has been used to suggest that neural populations are optimized to operate at a "critical point". However, these findings have been challenged by theoretical studies which have shown that common inputs can lead to diverging specific heat. Here, we connect "signatures of criticality", and in particular the divergence of specific heat, back to statistics of neural population activity commonly studied in neural coding: firing rates and pairwise correlations. We show that the specific heat diverges whenever the average correlation strength does not depend on population size. This is necessarily true when data with correlations is randomly subsampled during the analysis process, irrespective of the detailed structure or origin of correlations. We also show how the characteristic shape of specific heat capacity curves depends on firing rates and correlations, using both analytically tractable models and numerical simulations of a canonical feed-forward population model. To analyze these simulations, we develop efficient methods for characterizing large-scale neural population activity with maximum entropy models. We find that, consistent with experimental findings, increases in firing rates and correlation directly lead to more pronounced signatures. Thus, previous reports of thermodynamical criticality in neural populations based on the analysis of specific heat can be explained by average firing rates and correlations, and are not indicative of an optimized coding strategy. We conclude that a reliable interpretation of statistical tests for theories of neural coding is possible only in reference to relevant ground-truth models.

Indexed as

Models, NeurologicalAnimalsCatsComputational BiologyNeuronsRetinal Ganglion CellsThermodynamics

Identifiers

PMID28972970
PMCPMC5640238

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.