Evidence map›Paper›PMID 28971338›Full record

ArticleJournal of the American Society for Mass Spectrometry2018

Fourier Transform-Ion Cyclotron Resonance Mass Spectrometry as a Platform for Characterizing Multimeric Membrane Protein Complexes.

Jennifer L Lippens, Michael Nshanian, Chris Spahr, Pascal F Egea, Joseph A Loo, Iain D G Campuzano

Abstract read
In one paragraph

Article in Journal of the American Society for Mass Spectrometry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
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  5. Review
  6. Ion mobility-mass spectrometry reveals the role of peripheral myelin protein dimers in peripheral neuropathy.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  7. Review
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Native vs Denatured: An in Depth Investigation of Charge State and Isotope Distributions.Journal of the American Society for Mass Spectrometry · 2020
    Article
  14. Native IM-Orbitrap MS: Resolving What Was Hidden.Trends in analytical chemistry : TRAC · 2020
    Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jennifer L LippensDiscovery Attribute Sciences, Amgen, Thousand Oaks, CA, 91320, USA.
Michael NshanianDepartment of Chemistry and Biochemistry, University of California-Los Angeles, Los Angeles, CA, 90095, USA.
Chris SpahrDiscovery Attribute Sciences, Amgen, Thousand Oaks, CA, 91320, USA.
Pascal F EgeaDepartment of Biological Chemistry and Molecular Biology Institute, University of California-Los Angeles, Los Angeles, CA, 90095, USA.
Joseph A LooDepartment of Chemistry and Biochemistry, University of California-Los Angeles, Los Angeles, CA, 90095, USA. jloo@chem.ucla.edu.
Iain D G CampuzanoDiscovery Attribute Sciences, Amgen, Thousand Oaks, CA, 91320, USA. iainc@amgen.com.

Funding

UV Laser for Photodissociation-Mass Spectrometry of Proteins and Protein ComplexesR01GM103479 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LOO, JOSEPH A · 2012 to 2021
$3.2M
Ultra-High Resolution Mass Spectrometer for Biomedical ResearchS10RR028893 · NCRR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LOO, JOSEPH A · 2010 to 2010
$2.7M
Molecular Structure and Function of an Endoplasmic Reticulum-Mitochondrion TetherR01GM120173 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI EGEA, PASCAL FRANCOIS · 2017 to 2021
$1.5M
NCRR NIH HHS S10 RR028893NIGMS NIH HHS R01 GM103479NIGMS NIH HHS R01 GM120173NIH HHS R01GM103479NIH HHS S10RR028893U.S. Department of Energy DE-FC03-02ER63421
6 · The paper itself

Abstract

Membrane protein characterization is consistently hampered by challenges with expression, purification, and solubilization. Among several biophysical techniques employed for their characterization, native-mass spectrometry (MS) has emerged as a powerful tool for the analysis of membrane proteins and complexes. Here, two MS platforms, the FT-ICR and Q-ToF, have been explored to analyze the homotetrameric water channel protein, AquaporinZ (AqpZ), under non-denaturing conditions. This 97 kDa membrane protein complex can be readily liberated from the octylglucoside (OG) detergent micelle under a range of instrument conditions on both MS platforms. Increasing the applied collision energy of the FT-ICR collision cell yielded varying degrees of tetramer (97 kDa) liberation from the OG micelles, as well as dissociation into the trimeric (72 kDa) and monomeric (24 kDa) substituents. Tandem-MS on the Q-ToF yielded higher intensity tetramer signal and, depending on the m/z region selected, the observed monomer signal varied in intensity. Precursor ion selection of an m/z range above the expected protein signal distribution, followed by mild collisional activation, is able to efficiently liberate AqpZ with a high S/N ratio. The tetrameric charge state distribution obtained on both instruments demonstrated superpositioning of multiple proteoforms due to varying degrees of N-terminal formylation. Graphical Abstract ᅟ.

Indexed as

AquaporinsChromatography, LiquidCyclotronsDetergentsEquipment DesignEscherichia coli ProteinsMass SpectrometryMembrane ProteinsMicellesMultiprotein ComplexesProtein DenaturationProtein MultimerizationTandem Mass SpectrometryaqpZ protein, E coliAquaporinsDetergentsEscherichia coli ProteinsMembrane ProteinsMicellesMultiprotein ComplexesFourier transform ion cyclotron resonanceMembrane proteinNative-mass spectrometry

Identifiers

PMID28971338
PMCPMC5786498

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.