Evidence map›Paper›PMID 28970478›Full record

ArticleNature plants2017

In vivo gibberellin gradients visualized in rapidly elongating tissues.

Annalisa Rizza, Ankit Walia, Viviane Lanquar, Wolf B Frommer, Alexander M Jones

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Nature plants, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 88 papers.

0numbers the graph read from it
0cells of the map it votes in
88citing papers in PubMed
31.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

88 citing papers in PubMed, 190 citations in OpenAlex.

  1. Article
  2. Review
  3. Towards an integrated molecular understanding of plant hormones.Journal of integrative plant biology · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. A balance of metabolism and diffusion articulates a gibberellin hormone gradient in theProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Gibberellin-deactivating GA2OX enzymes act as a hub for auxin-gibberellin cross talk inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

28 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 3 countries.

Annalisa RizzaSainsbury Laboratory, Cambridge University, Cambridge, UK.
Ankit WaliaSainsbury Laboratory, Cambridge University, Cambridge, UK.
Viviane LanquarCarnegie Institution for Science, Department of Plant Biology, Stanford, CA, USA.
Wolf B FrommerCarnegie Institution for Science, Department of Plant Biology, Stanford, CA, USA. frommew@hhu.de.
Alexander M JonesSainsbury Laboratory, Cambridge University, Cambridge, UK. alexander.jones@slcu.cam.ac.uk.ORCID http://orcid.org/0000-0002-3662-2915
Carnegie Institution for Science · USUniversity of Cambridge · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The phytohormone gibberellin (GA) is a key regulator of plant growth and development. Although the upstream regulation and downstream responses to GA vary across cells and tissues, developmental stages and environmental conditions, the spatiotemporal distribution of GA in vivo remains unclear. Using a combinatorial screen in yeast, we engineered an optogenetic biosensor, GIBBERELLIN PERCEPTION SENSOR 1 (GPS1), that senses nanomolar levels of bioactive GAs. Arabidopsis thaliana plants expressing a nuclear localized GPS1 report on GAs at the cellular level. GA gradients were correlated with gradients of cell length in rapidly elongating roots and dark-grown hypocotyls. In roots, accumulation of exogenously applied GA also correlated with cell length, intimating that a root GA gradient can be established independently of GA biosynthesis. In hypocotyls, GA levels were reduced in a phytochrome interacting factor (pif) quadruple mutant in the dark and increased in a phytochrome double mutant in the light, indicating that PIFs elevate GA in the dark and that phytochrome inhibition of PIFs could lower GA in the light. As GA signalling directs hypocotyl elongation largely through promoting PIF activity, PIF promotion of GA accumulation represents a positive feedback loop within the molecular framework driving rapid hypocotyl growth.

Indexed as

Biosensing TechniquesArabidopsisArabidopsis ProteinsFluorescence Resonance Energy TransferGibberellinsPlant CellsReceptors, Cell SurfaceTissue DistributionArabidopsis ProteinsGibberellinsGID1a protein, ArabidopsisReceptors, Cell Surface

Identifiers

PMID28970478
OpenAlexW2757269129

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.