Evidence map›Paper›PMID 28968978›Full record

ArticleOncotarget2017

Linda J W Bosch, Geert Trooskens, Petur Snaebjornsson, Veerle M H Coupé, Sandra Mongera, Josien C Haan, Susan D Richman, Miriam Koopman, Jolien Tol, Tim de Meyer and 14 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. SerumOncotarget · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 13 institutions in 4 countries.

Linda J W BoschDepartment of Pathology, VU University Medical Center, Amsterdam, The Netherlands.
Geert Trooskens *Department of Mathematical Modelling, Statistics and Bioinformatics, Ghent University, Ghent, Belgium.
Petur Snaebjornsson *Department of Pathology, VU University Medical Center, Amsterdam, The Netherlands.
Veerle M H CoupéDepartment of Epidemiology and Biostatistics, VU University Medical Center, Amsterdam, The Netherlands.
Sandra MongeraDepartment of Pathology, VU University Medical Center, Amsterdam, The Netherlands.
Josien C HaanDepartment of Pathology, VU University Medical Center, Amsterdam, The Netherlands.
Susan D RichmanPathology and Tumour Biology, University of Leeds, Leeds, UK.
Miriam KoopmanDepartment of Medical Oncology, University Medical Center Utrecht, Utrecht, The Netherlands.
Jolien TolDepartment of Internal Medicine, Jeroen Bosch Hospital, 's-Hertogenbosch, The Netherlands.
Tim de MeyerDepartment of Mathematical Modelling, Statistics and Bioinformatics, Ghent University, Ghent, Belgium.
Joost LouwagieMDxHealth, SA, Liège, Belgium.
Luc DehaspeMDxHealth, SA, Liège, Belgium.
Nicole C T van GriekenDepartment of Pathology, VU University Medical Center, Amsterdam, The Netherlands.
Bauke YlstraDepartment of Pathology, VU University Medical Center, Amsterdam, The Netherlands.
Henk M W VerheulDepartment of Oncology, VU University Medical Center, Amsterdam, The Netherlands.
Manon van EngelandDepartment of Pathology, GROW - School for Oncology and Developmental Biology and Maastricht University Medical Center, Maastricht, The Netherlands.
Iris D NagtegaalDepartment of Pathology, Radboud University Nijmegen Medical Center, Nijmegen, The Netherlands.
James G HermanDepartment of Medicine, University of Pittsburgh, Pittsburgh, PA, USA.
Philip QuirkePathology and Tumour Biology, University of Leeds, Leeds, UK.
Matthew T SeymourSt James's Institute of Oncology, St James's University Hospital, Leeds, UK.
Cornelis J A PuntDepartment of Medical Oncology, Academic Medical Center, Amsterdam, The Netherlands.
Wim van CriekingeDepartment of Pathology, VU University Medical Center, Amsterdam, The Netherlands.
Beatriz CarvalhoDepartment of Pathology, VU University Medical Center, Amsterdam, The Netherlands.
Gerrit A MeijerDepartment of Pathology, VU University Medical Center, Amsterdam, The Netherlands.
Amsterdam UMC Location VUmc · NLGhent University · BEUniversity of Leeds · GBAcademic Medical Center · NLJeroen Bosch Ziekenhuis · NLMaastricht University · NLOncode Institute · NLRadboud University Nijmegen · NLSt James's University Hospital · GBThe Netherlands Cancer Institute · NLUniversitair Ziekenhuis Leuven · BEUniversity Medical Center Utrecht · NLUniversity of Pittsburgh · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Diversity in colorectal cancer biology is associated with variable responses to standard chemotherapy. We aimed to identify and validate DNA hypermethylated genes as predictive biomarkers for irinotecan treatment of metastatic CRC patients. Candidate genes were selected from 389 genes involved in DNA Damage Repair by correlation analyses between gene methylation status and drug response in 32 cell lines. A large series of samples (n=818) from two phase III clinical trials was used to evaluate these candidate genes by correlating methylation status to progression-free survival after treatment with first-line single-agent fluorouracil (Capecitabine or 5-fluorouracil) or combination chemotherapy (Capecitabine or 5-fluorouracil plus irinotecan (CAPIRI/FOLFIRI)). In the discovery (n=185) and initial validation set (n=166), patients with methylated

Indexed as

biomarkerCAIROchemotherapypredictiveTNFRSF10C

Identifiers

PMID28968978
PMCPMC5609910
OpenAlexW2730325445

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.