Evidence map›Paper›PMID 28968905›Full record

ArticleThe Journal of infectious diseases2017

Yellow Fever Virus, but Not Zika Virus or Dengue Virus, Inhibits T-Cell Receptor-Mediated T-Cell Function by an RNA-Based Mechanism.

James H McLinden, Nirjal Bhattarai, Jack T Stapleton, Qing Chang, Thomas M Kaufman, Suzanne L Cassel, Fayyaz S Sutterwala, Hillel Haim, Jon C Houtman, Jinhua Xiang

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in The Journal of infectious diseases, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.7field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Flow Cytometry as Immunoassay Tool for Research on Yellow Fever Virus.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

James H McLindenResearch Service, Iowa City Veterans Affairs Medical Center.
Nirjal BhattaraiResearch Service, Iowa City Veterans Affairs Medical Center.
Jack T StapletonResearch Service, Iowa City Veterans Affairs Medical Center.
Qing ChangResearch Service, Iowa City Veterans Affairs Medical Center.
Thomas M KaufmanResearch Service, Iowa City Veterans Affairs Medical Center.
Suzanne L CasselResearch Service, Iowa City Veterans Affairs Medical Center.
Fayyaz S SutterwalaResearch Service, Iowa City Veterans Affairs Medical Center.
Hillel HaimResearch Service, Iowa City Veterans Affairs Medical Center.
Jon C HoutmanResearch Service, Iowa City Veterans Affairs Medical Center.
Jinhua XiangResearch Service, Iowa City Veterans Affairs Medical Center.
University of Iowa · USVeterans Health Administration · US

Funding

Viral VectorP30CA086862 · NCI · UNIVERSITY OF IOWA · PI Douglas Robert Spitz · 2000 to 2026
$70.0M
The role of HCV RNA-targeted phosphatase PTPRE in T cell activationR56AI126493 · NIAID · UNIVERSITY OF IOWA · PI HOUTMAN, JON C.D., STAPLETON, JACK T. · 2017 to 2017
$538k
The effects of hepatitis C virus (HCV) E2 protein on host immunomodulationI01BX000207 · VA · IOWA CITY VA MEDICAL CENTER · PI STAPLETON, JACK T. · 2009 to 2025
–
GB Virus C and Non-Hodgkins Lymphoma Risk and PrognosisI01CX000821 · VA · IOWA CITY VA MEDICAL CENTER · PI STAPLETON, JACK T. · 2013 to 2016
–
BLRD VA I01 BX000207BLRD VA I01 BX001241CSRD VA I01 CX000821NCI NIH HHS P30 CA086862NIAID NIH HHS R56 AI126493
6 · The paper itself

Abstract

The Flavivirus genus within the Flaviviridae family is comprised of many important human pathogens including yellow fever virus (YFV), dengue virus (DENV), and Zika virus (ZKV), all of which are global public health concerns. Although the related flaviviruses hepatitis C virus and human pegivirus (formerly named GBV-C) interfere with T-cell receptor (TCR) signaling by novel RNA and protein-based mechanisms, the effect of other flaviviruses on TCR signaling is unknown. Here, we studied the effect of YFV, DENV, and ZKV on TCR signaling. Both YFV and ZKV replicated in human T cells in vitro; however, only YFV inhibited TCR signaling. This effect was mediated at least in part by the YFV envelope (env) protein coding RNA. Deletion mutagenesis studies demonstrated that expression of a short, YFV env RNA motif (vsRNA) was required and sufficient to inhibit TCR signaling. Expression of this vsRNA and YFV infection of T cells reduced the expression of a Src-kinase regulatory phosphatase (PTPRE), while ZKV infection did not. YFV infection in mice resulted in impaired TCR signaling and PTPRE expression, with associated reduction in murine response to experimental ovalbumin vaccination. Together, these data suggest that viruses within the flavivirus genus inhibit TCR signaling in a species-dependent manner.

Indexed as

Dengue VirusHumansReceptors, Antigen, T-CellRNASignal TransductionVirus ReplicationYellow fever virusZika VirusReceptors, Antigen, T-CellRNAflavivirusPTPRET-cell receptorvirus-derived short RNAyellow fever virus

Identifiers

PMID28968905
PMCPMC5853456
OpenAlexW2750896424

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.