ArticleBioinformatics (Oxford, England)2018
LinkageMapView-rendering high-resolution linkage and QTL maps.
Article in Bioinformatics (Oxford, England), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 124 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
124 citing papers in PubMed.
- Leaf variegation in a barley EMS mutant is controlled by two epistatic mutations.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Genetic mapping and nuclear interactions of an incompatibility response in Agaricus bisporus.G3 (Bethesda, Md.) · 2026Article
- Mapping and Functional Characterization of Homologous Genes AhSUCA06 and AhSUCA16 Underlying Sucrose, Oil and Protein Contents in Peanut (Arachis hypogaea L.).Plant biotechnology journal · 2026Article
- Identification of a novel major QTL and F-box candidate genes controlling seed dormancy in common wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- KhufuEnv, an auxiliary toolkit for building computational pipelines for plant and animal breeding.BMC bioinformatics · 2026Article
- Article
- Genome-wide association study (GWAS) identifies genetic loci controlling Distinctness, Uniformity, and Stability (DUS) traits in wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Identification and validation of novel and stable QTL for Gibberella stalk rot resistance in maize inbred KA105.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Dissecting fruit weight and quality traits in Australian passion fruit through genetic linkage mapping and QTL analysis.Frontiers in plant science · 2026Article
- Construction of an introgression line population for cultivated peanut (Frontiers in plant science · 2026Article
- Combining two high-density QTL maps with a reference genome to identify candidate genes for morphology, yield, and biotic resistance in faba bean (Frontiers in plant science · 2026Article
- Association mapping of wheat distinctness, uniformity, and stability traits identifies evidence ofFrontiers in plant science · 2026Article
- Identification of phenological QTLs using a combination of high- and low-coverage whole genome sequencing in Japanese plum (Horticulture research · 2026Article
- QTL mapping and haplotype analysis reveal candidate genes for seedling-stage salinity tolerance in rice.Frontiers in plant science · 2026Article
- Genetic mapping reveals QTLs associated with HLB response determined byFrontiers in plant science · 2026Article
- QTL mapping of key phenological and morphological traits in grain amaranth (Breeding science · 2025Article
- A major and stable QTL confers impatiens necrotic spot virus resistance in lettuce cv. Eruption.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Combination of QTL mapping and GWAS for fine mapping and gene mining of drought tolerance and seed yield components in faba bean (Vicia faba L.).BMC plant biology · 2025Article
- Trait mapping differentiates loci influencing spike and flag leaf glaucousness in wheat.The plant genome · 2025Article
- Linkage map construction and QTL mapping for morphological traits in Ipomoea trifida, a diploid sweetpotato relative.The plant genome · 2025Article
64 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
4 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
motivationLinkage and quantitative trait loci (QTL) maps are critical tools for the study of the genetic basis of complex traits. With the advances in sequencing technology over the past decade, linkage map densities have been increasing dramatically, while the visualization tools have not kept pace. LinkageMapView is a free add-on package written in R that produces high resolution, publication-ready visualizations of linkage and QTL maps. While there is software available to generate linkage map graphics, none are freely available, produce publication quality figures, are open source and can run on all platforms. LinkageMapView can be integrated into map building pipelines as it seamlessly incorporates output from R/qtl and also accepts simple text or comma delimited files. There are numerous options within the package to build highly customizable maps, allow for linkage group comparisons, and annotate QTL regions. AVAILABILITY AND IMPLEMENTATION: https://cran.r-project.org/web/packages/LinkageMapView/.
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.