Evidence map›Paper›PMID 28968444›Full record

ArticlePloS one2017

One-carbon genetic variants and the role of MTHFD1 1958G>A in liver and colon cancer risk according to global DNA methylation.

Sara Moruzzi, Patrizia Guarini, Silvia Udali, Andrea Ruzzenente, Alfredo Guglielmi, Simone Conci, Patrizia Pattini, Nicola Martinelli, Oliviero Olivieri, Stephanie A Tammen and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 31 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Common Variants in One-Carbon Metabolism Genes (International journal of molecular sciences · 2023
    Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Methylenetetrahydrofolate Dehydrogenase 1 Silencing Expedites the Apoptosis of Non-Small Cell Lung Cancer Cells via Modulating DNA Methylation.Medical science monitor : international medical journal of experimental and clinical research · 2018
    Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 3 countries.

Sara MoruzziDepartment of Medicine, University of Verona School of Medicine, Verona, Italy.
Patrizia GuariniDepartment of Medicine, University of Verona School of Medicine, Verona, Italy.
Silvia UdaliDepartment of Medicine, University of Verona School of Medicine, Verona, Italy.
Andrea RuzzenenteDepartment of Surgery, Division of General and Hepatobiliary Surgery, University of Verona School of Medicine, Verona, Italy.
Alfredo GuglielmiDepartment of Surgery, Division of General and Hepatobiliary Surgery, University of Verona School of Medicine, Verona, Italy.
Simone ConciDepartment of Surgery, Division of General and Hepatobiliary Surgery, University of Verona School of Medicine, Verona, Italy.
Patrizia PattiniDepartment of Medicine, University of Verona School of Medicine, Verona, Italy.
Nicola MartinelliDepartment of Medicine, University of Verona School of Medicine, Verona, Italy.
Oliviero OlivieriDepartment of Medicine, University of Verona School of Medicine, Verona, Italy.
Stephanie A TammenFriedman School of Nutrition Science and Policy, Tufts University, Boston, Massachusetts, United States of America.
Sang-Woon ChoiFriedman School of Nutrition Science and Policy, Tufts University, Boston, Massachusetts, United States of America.
Simonetta FrisoDepartment of Medicine, University of Verona School of Medicine, Verona, Italy.ORCID http://orcid.org/0000-0002-9606-6711
University of Verona · ITTufts University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Several polymorphic gene variants within one-carbon metabolism, an essential pathway for nucleotide synthesis and methylation reactions, are related to cancer risk. An aberrant DNA methylation is a common feature in cancer but whether the link between one-carbon metabolism variants and cancer occurs through an altered DNA methylation is yet unclear. Aims of the study were to evaluate the frequency of one-carbon metabolism gene variants in hepatocellular-carcinoma, cholangiocarcinoma and colon cancer, and their relationship to cancer risk together with global DNA methylation status. Genotyping for BHMT 716A>G, DHFR 19bp ins/del, MTHFD1 1958G>A, MTHFR 677C>T, MTR 2756A>G, MTRR 66A>G, RFC1 80G>A, SHMT1 1420C>T, TCII 776C>G and TS 2rpt-3rpt was performed in 102 cancer patients and 363 cancer-free subjects. Methylcytosine (mCyt) content was measured by LC/MS/MS in peripheral blood mononuclear cells (PBMCs) DNA. The MTHFD1 1958AA genotype was significantly less frequent among cancer patients as compared to controls (p = 0.007) and related to 63% reduction of overall cancer risk (p = 0.003) and 75% of colon cancer risk (p = 0.006). When considering PBMCs mCyt content, carriers of the MTHFD1 1958GG genotype showed a lower DNA methylation as compared to carriers of the A allele (p = 0.048). No differences were highlighted by evaluating a possible relationship between the other polymorphisms analyzed with cancer risk and DNA methylation. The MTHFD1 1958AA genotype is linked to a significantly reduced cancer risk. The 1958GG genotype is associated to PBMCs DNA hypomethylation as compared to the A allele carriership that may exert a protective effect for cancer risk by preserving from DNA hypomethylation.

Indexed as

DNA MethylationAgedCarbonColonic NeoplasmsFemaleGenotypeHumansLiver NeoplasmsMaleMethylenetetrahydrofolate Dehydrogenase (NADP)Middle AgedMinor Histocompatibility AntigensCarbonMethylenetetrahydrofolate Dehydrogenase (NADP)Minor Histocompatibility AntigensMTHFD1 protein, human

Identifiers

PMID28968444
PMCPMC5624642
OpenAlexW2761762672

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.