Evidence map›Paper›PMID 28967919›Full record

ArticleNature medicine2017

Chromosome 1q21.3 amplification is a trackable biomarker and actionable target for breast cancer recurrence.

Jian Yuan Goh, Min Feng, Wenyu Wang, Gokce Oguz, Siti Maryam J M Yatim, Puay Leng Lee, Yi Bao, Tse Hui Lim, Panpan Wang, Wai Leong Tam and 12 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature medicine, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 106 papers.

0numbers the graph read from it
0cells of the map it votes in
106citing papers in PubMed
6.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

106 citing papers in PubMed, 156 citations in OpenAlex.

  1. Article
  2. Multi-omic Profiling of Recurrence Risk Across Breast Cancer Subtypes.medRxiv : the preprint server for health sciences · 2026
    Article
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  17. Review
  18. Genomic Landscape of Pulmonary Sarcomatoid Carcinoma.Cancer research and treatment · 2024
    Article
  19. Role of micronucleus-activated cGAS-STING signaling in antitumor immunity.Zhejiang da xue xue bao. Yi xue ban = Journal of Zhejiang University. Medical sciences · 2024
    Review
  20. Article

46 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 9 institutions in 4 countries.

Jian Yuan GohGenome Institute of Singapore, Agency for Science, Technology and Research (A*STAR), Biopolis, Singapore.
Min FengGenome Institute of Singapore, Agency for Science, Technology and Research (A*STAR), Biopolis, Singapore.
Wenyu WangGenome Institute of Singapore, Agency for Science, Technology and Research (A*STAR), Biopolis, Singapore.
Gokce OguzGenome Institute of Singapore, Agency for Science, Technology and Research (A*STAR), Biopolis, Singapore.
Siti Maryam J M YatimGenome Institute of Singapore, Agency for Science, Technology and Research (A*STAR), Biopolis, Singapore.
Puay Leng LeeGenome Institute of Singapore, Agency for Science, Technology and Research (A*STAR), Biopolis, Singapore.
Yi BaoGenome Institute of Singapore, Agency for Science, Technology and Research (A*STAR), Biopolis, Singapore.
Tse Hui LimCytogenetics Laboratory, Department of Pathology, Singapore General Hospital, Singapore.
Panpan WangCancer Research Institute and School of Pharmacy, Jinan University, Guangzhou, China.
Wai Leong TamGenome Institute of Singapore, Agency for Science, Technology and Research (A*STAR), Biopolis, Singapore.ORCID http://orcid.org/0000-0003-2365-5264
Annette R KodahlDepartment of Oncology, Odense University Hospital, Odense, Denmark.
Maria B LyngDepartment of Cancer and Inflammation Research, Institute of Molecular Medicine, University of Southern Denmark, Odense, Denmark.
Suman SarmaGenome Institute of Singapore, Agency for Science, Technology and Research (A*STAR), Biopolis, Singapore.
Selena Y LinDepartment of Translational Molecular Medicine, John Wayne Cancer Institute, Santa Monica, California, USA.
Alexander LezhavaGenome Institute of Singapore, Agency for Science, Technology and Research (A*STAR), Biopolis, Singapore.
Yoon Sim YapDivision of Medical Oncology, National Cancer Centre Singapore, Singapore.
Alvin S T LimCytogenetics Laboratory, Department of Pathology, Singapore General Hospital, Singapore.
Dave S B HoonDepartment of Translational Molecular Medicine, John Wayne Cancer Institute, Santa Monica, California, USA.ORCID http://orcid.org/0000-0003-1915-3683
Henrik J DitzelDepartment of Oncology, Odense University Hospital, Odense, Denmark.ORCID http://orcid.org/0000-0003-3927-5135
Soo Chin LeeCancer Science Institute of Singapore, National University of Singapore, Singapore.
Ern Yu TanDepartment of General Surgery, Tan Tock Seng Hospital, Singapore.
Qiang YuGenome Institute of Singapore, Agency for Science, Technology and Research (A*STAR), Biopolis, Singapore.
Agency for Science, Technology and Research · SGSaint John's Health Center · USSingapore General Hospital · SGUniversity of Southern Denmark · DKJinan University · CNNational Cancer Centre Singapore · SGNational University of Singapore · SGOdense University Hospital · DKTan Tock Seng Hospital · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tumor recurrence remains the main reason for breast cancer-associated mortality, and there are unmet clinical demands for the discovery of new biomarkers and development of treatment solutions to benefit patients with breast cancer at high risk of recurrence. Here we report the identification of chromosomal copy-number amplification at 1q21.3 that is enriched in subpopulations of breast cancer cells bearing characteristics of tumor-initiating cells (TICs) and that strongly associates with breast cancer recurrence. Amplification is present in ∼10-30% of primary tumors but in more than 70% of recurrent tumors, regardless of breast cancer subtype. Detection of amplification in cell-free DNA (cfDNA) from blood is strongly associated with early relapse in patients with breast cancer and could also be used to track the emergence of tumor resistance to chemotherapy. We further show that 1q21.3-encoded S100 calcium-binding protein (S100A) family members, mainly S100A7, S100A8, and S100A9 (S100A7/8/9), and IL-1 receptor-associated kinase 1 (IRAK1) establish a reciprocal feedback loop driving tumorsphere growth. Notably, this functional circuitry can be disrupted by the small-molecule kinase inhibitor pacritinib, leading to preferential impairment of the growth of 1q21.3-amplified breast tumors. Our study uncovers the 1q21.3-directed S100A7/8/9-IRAK1 feedback loop as a crucial component of breast cancer recurrence, serving as both a trackable biomarker and an actionable therapeutic target for breast cancer.

Indexed as

Chromosomes, Human, Pair 1AnimalsAntineoplastic AgentsBiomarkers, TumorBreast NeoplasmsBridged-Ring CompoundsCell-Free Nucleic AcidsDisease ProgressionFemaleHeterograftsHumansIn Situ Hybridization, FluorescenceMiceNeoplasm Recurrence, LocalPolymerase Chain ReactionPyrimidines11-(2-pyrrolidin-1-ylethoxy)-14,19-dioxa-5,7,26-triazatetracyclo(19.3.1.1(2,6).1(8,12))heptacosa-1(25),2(26),3,5,8,10,12(27),16,21,23-decaeneAntineoplastic AgentsBiomarkers, TumorBridged-Ring CompoundsCell-Free Nucleic AcidsPyrimidines

Identifiers

PMID28967919
OpenAlexW2758252083

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.