Evidence map›Paper›PMID 28966702›Full record

ArticleElectronic journal of statistics2016

Estimation of multiple networks in Gaussian mixture models.

Chen Gao, Yunzhang Zhu, Xiaotong Shen, Wei Pan

Abstract read
In one paragraph

Article in Electronic journal of statistics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
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  3. Article
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  5. Article
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  9. Article
  10. Penalized model-based clustering of fMRI data.Biostatistics (Oxford, England) · 2022
    Article
  11. Article
  12. Article
  13. Simultaneous Clustering and Estimation of Heterogeneous Graphical Models.Journal of machine learning research : JMLR · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Chen GaoDivision of Biostatistics, School of Public Health, University of Minnesota.
Yunzhang ZhuDepartment of Statistics, Ohio State University.
Xiaotong ShenSchool of Statistics, University of Minnesota.
Wei PanDivision of Biostatistics, School of Public Health, University of Minnesota.

Funding

Association analysis of rare variants with sequencing dataR01HL116720 · NHLBI · UNIVERSITY OF MINNESOTA · PI PAN, WEI, WEI, PENG · 2013 to 2020
$3.3M
Powerful Inference and Prediction for Genetic AssociationR01HL105397 · NHLBI · UNIVERSITY OF MINNESOTA · PI PAN, WEI, SHEN, XIAOTONG TOM · 2011 to 2018
$2.9M
New Machine Learning Tools for Biomedical DataR01GM081535 · NIGMS · UNIVERSITY OF MINNESOTA · PI PAN, WEI, SHEN, XIAOTONG TOM · 2007 to 2014
$2.2M
Statistical Methods for Genomic DataR01GM113250 · NIGMS · UNIVERSITY OF MINNESOTA · PI PAN, WEI · 2014 to 2017
$702k
NHLBI NIH HHS R01 HL105397NHLBI NIH HHS R01 HL116720NIGMS NIH HHS R01 GM081535NIGMS NIH HHS R01 GM113250
6 · The paper itself

Abstract

We aim to estimate multiple networks in the presence of sample heterogeneity, where the independent samples (i.e. observations) may come from different and unknown populations or distributions. Specifically, we consider penalized estimation of multiple precision matrices in the framework of a Gaussian mixture model. A major innovation is to take advantage of the commonalities across the multiple precision matrices through possibly nonconvex fusion regularization, which for example makes it possible to achieve simultaneous discovery of unknown disease subtypes and detection of differential gene (dys)regulations in functional genomics. We embed in the EM algorithm one of two recently proposed methods for estimating multiple precision matrices in Gaussian graphical models. We demonstrate the feasibility and potential usefulness of the proposed methods in an application to glioblastoma subtype discovery and differential gene network analysis with a microarray gene expression data set. We also conduct realistic simulation studies to evaluate and compare the performance of various methods.

Indexed as

Disease subtype discoveryGaussian graphical modelgene expressionglioblastomamodel-based clusteringnon-convex penalty

Identifiers

PMID28966702
PMCPMC5620020

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.