Evidence map›Paper›PMID 28965830›Full record

ArticleMolecular plant2017

Initiation of ER Body Formation and Indole Glucosinolate Metabolism by the Plastidial Retrograde Signaling Metabolite, MEcPP.

Jin-Zheng Wang, Baohua Li, Yanmei Xiao, Yu Ni, Haiyan Ke, Panyu Yang, Amancio de Souza, Marta Bjornson, Xiang He, Zhouxin Shen and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular plant, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Metabolite control of enzyme activity links stress to biosynthetic regulation.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Chloroplast-associated molecular patterns as concept for fine-tuned operational retrograde signalling.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Review
  13. Uncovering the functional residues ofProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 2 countries.

Jin-Zheng WangInstitute for Integrative Genome Biology and Department of Botany and Plant Sciences, University of California, Riverside, CA 92521, USA; Department of Plant Biology, University of California, Davis, CA 95616, USA.
Baohua LiDepartment of Plant Sciences, University of California, Davis, CA 95616, USA.
Yanmei XiaoDepartment of Plant Biology, University of California, Davis, CA 95616, USA.
Yu NiDepartment of Plant Biology, University of California, Davis, CA 95616, USA.
Haiyan KeInstitute for Integrative Genome Biology and Department of Botany and Plant Sciences, University of California, Riverside, CA 92521, USA.
Panyu YangDepartment of Plant Biology, University of California, Davis, CA 95616, USA.
Amancio de SouzaInstitute for Integrative Genome Biology and Department of Botany and Plant Sciences, University of California, Riverside, CA 92521, USA.
Marta BjornsonDepartment of Plant Biology, University of California, Davis, CA 95616, USA.
Xiang HeInstitute for Integrative Genome Biology and Department of Botany and Plant Sciences, University of California, Riverside, CA 92521, USA.
Zhouxin ShenDivision of Biological Sciences, University of California San Diego, La Jolla, CA 92093, USA.
Gerd Ulrich BalckeDepartment of Cell and Metabolic Biology, Leibniz-Institute of Plant Biochemistry, Halle, Germany.
Steve P BriggsDivision of Biological Sciences, University of California San Diego, La Jolla, CA 92093, USA.
Alain TissierDepartment of Cell and Metabolic Biology, Leibniz-Institute of Plant Biochemistry, Halle, Germany.
Daniel J KliebensteinDepartment of Plant Sciences, University of California, Davis, CA 95616, USA.
Katayoon DeheshInstitute for Integrative Genome Biology and Department of Botany and Plant Sciences, University of California, Riverside, CA 92521, USA; Department of Plant Biology, University of California, Davis, CA 95616, USA. Electronic address: kdehesh@ucr.edu.
University of California, Davis · USUniversity of California, Riverside · USLeibniz Institute of Plant Biochemistry · DEUniversity of California, San Diego · US

Funding

Defining the Retrograde Plastid-to-Nucleus Stress Signaling PathwayR01GM107311 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI DEHESH, KATAYOON · 2013 to 2021
$2.5M
NIGMS NIH HHS R01 GM107311
6 · The paper itself

Abstract

Plants have evolved tightly regulated signaling networks to respond and adapt to environmental perturbations, but the nature of the signaling hub(s) involved have remained an enigma. We have previously established that methylerythritol cyclodiphosphate (MEcPP), a precursor of plastidial isoprenoids and a stress-specific retrograde signaling metabolite, enables cellular readjustments for high-order adaptive functions. Here, we specifically show that MEcPP promotes two Brassicaceae-specific traits, namely endoplasmic reticulum (ER) body formation and induction of indole glucosinolate (IGs) metabolism selectively, via transcriptional regulation of key regulators NAI1 for ER body formation and MYB51/122 for IGs biosynthesis). The specificity of MEcPP is further confirmed by the lack of induction of wound-inducible ER body genes as well as IGs by other altered methylerythritol phosphate pathway enzymes. Genetic analyses revealed MEcPP-mediated COI1-dependent induction of these traits. Moreover, MEcPP signaling integrates the biosynthesis and hydrolysis of IGs through induction of nitrile-specifier protein1 and reduction of the suppressor, ESM1, and production of simple nitriles as the bioactive end product. The findings position the plastidial metabolite, MEcPP, as the initiation hub, transducing signals to adjust the activity of hard-wired gene circuitry to expand phytochemical diversity and alter the associated subcellular structure required for functionality of the secondary metabolites, thereby tailoring plant stress responses.

Indexed as

ArabidopsisArabidopsis ProteinsGene Expression Regulation, PlantGlucosinolatesPlastidsSignal TransductionArabidopsis ProteinsGlucosinolatesER bodyglucosinolatesMEcPPMEP pathwayretrograde signalingstress

Identifiers

PMID28965830
PMCPMC6368977
OpenAlexW2758799530

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.