Evidence map›Paper›PMID 28964290›Full record

ArticleInternational journal of pediatric otorhinolaryngology2017

Novel pathogenic variants underlie SLC26A4-related hearing loss in a multiethnic cohort.

Filiz Basak Cengiz, Rasim Yilmazer, Levent Olgun, Levent Sennaroglu, Tayfun Kirazli, Hudaver Alper, Yuksel Olgun, Armagan Incesulu, Tahir Atik, Fabiola Huesca-Hernandez and 15 more

Open access · greenAbstract read
In one paragraph

Article in International journal of pediatric otorhinolaryngology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.5field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 12 institutions in 4 countries.

Filiz Basak CengizJohn P. Hussman Institute for Human Genomics, University of Miami, Miller School of Medicine, Miami, FL, USA.
Rasim YilmazerYeditepe University, Medicine Faculty, Department of Ear Nose Throat Surgery, Istanbul, Turkey.
Levent OlgunDepartment of Otorhinolaryngology, Bozyaka Training and Research Hospital, Bozyaka, Izmir, 35170, Turkey.
Levent SennarogluDepartment of Otorinolaryngology, Hacettepe University School of Medicine, Ankara, Turkey.
Tayfun KirazliDepartment of Otolaryngology, Ege University School of Medicine, Izmir, 35040, Turkey.
Hudaver AlperDepartment of Radiology, Ege University School of Medicine, Izmir, 35040, Turkey.
Yuksel OlgunDepartment of Otorhinolaryngology, Bozyaka Training and Research Hospital, Bozyaka, Izmir, 35170, Turkey.
Armagan IncesuluDepartment of Otorinolaryngology, Head and Neck Surgery, Eskisehir Osmangazi University, Eskisehir, Turkey.
Tahir AtikDivision of Genetics, Department of Pediatrics, Ege University School of Medicine, Izmir, 35040, Turkey.
Fabiola Huesca-HernandezResearch Clinical Subdirection, National Institute of Rehabilitation, Mexico City, Mexico.
Juan Domínguez-AburtoResearch Clinical Subdirection, National Institute of Rehabilitation, Mexico City, Mexico.
Garly González-RosadoComputed Tomography Service, National Institute of Rehabilitation, Mexico City, Mexico.
Edgar Hernandez-ZamoraResearch Clinical Subdirection, National Institute of Rehabilitation, Mexico City, Mexico.
Maria de la Luz Arenas-SordoResearch Clinical Subdirection, National Institute of Rehabilitation, Mexico City, Mexico.
Ibis MenendezJohn P. Hussman Institute for Human Genomics, University of Miami, Miller School of Medicine, Miami, FL, USA.
Kadir Serkan OrhanDepartment of Otolaryngology and Head and Neck Surgery, Istanbul Faculty of Medicine, Istanbul University, Istanbul, Turkey.
Hakan AvciDepartment of Otolaryngology and Head and Neck Surgery, Istanbul Faculty of Medicine, Istanbul University, Istanbul, Turkey.
Nejat MahdiehRajaie Cardiovascular Medical and Research Center, Iran University of Medical Sciences, Tehran, Iran.
Mortaza BonyadiFaculty of Natural Sciences, Center of Excellence for Biodiversity, University of Tabriz, Tabriz, Iran.
Joseph FosterJohn P. Hussman Institute for Human Genomics, University of Miami, Miller School of Medicine, Miami, FL, USA.
Duygu DumanDivision of Pediatric Genetics, Ankara University School of Medicine, Ankara, Turkey.
Ferda OzkinayDivision of Genetics, Department of Pediatrics, Ege University School of Medicine, Izmir, 35040, Turkey.
Susan H BlantonJohn P. Hussman Institute for Human Genomics, University of Miami, Miller School of Medicine, Miami, FL, USA; Dr. John T. Macdonald Foundation, Department of Human Genetics, University of Miami, Miller School of Medicine, Miami, FL, USA; Department of Otorhinolaryngology, University of Miami, Miller School of Medicine, Miami, FL, USA.
Guney BademciJohn P. Hussman Institute for Human Genomics, University of Miami, Miller School of Medicine, Miami, FL, USA.
Mustafa TekinJohn P. Hussman Institute for Human Genomics, University of Miami, Miller School of Medicine, Miami, FL, USA; Dr. John T. Macdonald Foundation, Department of Human Genetics, University of Miami, Miller School of Medicine, Miami, FL, USA; Department of Otorhinolaryngology, University of Miami, Miller School of Medicine, Miami, FL, USA. Electronic address: mtekin@med.miami.edu.
Instituto Nacional de Rehabilitación · MXUniversity of Miami · USEge University · TRIstanbul University · TRIzmir Bozyaka Eğitim ve Araştırma Hastanesi · TRAnkara University · TRDr. John T. Macdonald Foundation · USEskişehir Osmangazi University · TRHacettepe University · TRIran University of Medical Sciences · IRUniversity of Tabriz · IRYeditepe University · TR

Funding

A Collaborative Search for New Genes for Non-Syndromic DeafnessR01DC009645 · NIDCD · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI MUSTAFA TEKIN · 2010 to 2026
$11.8M
Genetic Studies of Inner Ear AnomaliesR01DC012836 · NIDCD · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI TEKIN, MUSTAFA · 2013 to 2017
$3.2M
NIDCD NIH HHS R01 DC009645NIDCD NIH HHS R01 DC012836
6 · The paper itself

Abstract

objectivesThe genetics of sensorineural hearing loss is characterized by a high degree of heterogeneity. Despite this heterogeneity, DNA variants found within SLC26A4 have been reported to be the second most common contributor after those of GJB2 in many populations.

methodsWhole exome sequencing and/or Sanger sequencing of SLC26A4 in 117 individuals with sensorineural hearing loss with or without inner ear anomalies but not with goiter from Turkey, Iran, and Mexico were performed.

resultsWe identified 27 unique SLC26A4 variants in 31 probands. The variants c.1673A > G (p.N558S), c.1708-1G > A, c.1952C > T (p.P651L), and c.2090-1G > A have not been previously reported. The p.N558S variant was detected in two unrelated Mexican families.

conclusionA range of SLC26A4 variants without a common recurrent mutation underlies SLC26A4-related hearing loss in Turkey, Iran, and Mexico.

Indexed as

Ear, InnerFemaleHearing Loss, SensorineuralHumansIranMaleMembrane Transport ProteinsMexicoMutationSequence Analysis, DNASulfate TransportersTurkeyMembrane Transport ProteinsSLC26A4 protein, humanSulfate TransportersHearing lossSLC26A4Whole exome sequencing

Identifiers

PMID28964290
PMCPMC5679420
OpenAlexW2744474134

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.