Evidence map›Paper›PMID 28963353›Full record

ArticleCancer discovery2018

Somatic Superenhancer Duplications and Hotspot Mutations Lead to Oncogenic Activation of the KLF5 Transcription Factor.

Xiaoyang Zhang, Peter S Choi, Joshua M Francis, Galen F Gao, Joshua D Campbell, Aruna Ramachandran, Yoichiro Mitsuishi, Gavin Ha, Juliann Shih, Francisca Vazquez and 9 more

Open access · greenAbstract read
In one paragraph

Article in Cancer discovery, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed, 1 pooled it
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed, 1 synthesis or guideline pooled it, 126 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Crosstalk BetweenCancers · 2026
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. CRISPR/Cas9: a powerful tool in colorectal cancer research.Journal of experimental & clinical cancer research : CR · 2023
    Review
  16. Review
  17. Article
  18. Article
  19. Review
  20. Review

25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 1 institution in 1 country.

Xiaoyang ZhangDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Peter S ChoiDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Joshua M FrancisDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Galen F GaoCancer Program, Broad Institute of Harvard and MIT, Cambridge, Massachusetts.
Joshua D CampbellDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Aruna RamachandranDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Yoichiro MitsuishiDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Gavin HaDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Juliann ShihCancer Program, Broad Institute of Harvard and MIT, Cambridge, Massachusetts.
Francisca VazquezCancer Program, Broad Institute of Harvard and MIT, Cambridge, Massachusetts.
Aviad TsherniakCancer Program, Broad Institute of Harvard and MIT, Cambridge, Massachusetts.
Alison M TaylorDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Jin ZhouDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Zhong WuDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Ashton C BergerCancer Program, Broad Institute of Harvard and MIT, Cambridge, Massachusetts.
Marios GiannakisDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
William C HahnDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Andrew D CherniackDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Matthew MeyersonDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts. matthew_meyerson@dfci.harvard.edu.
Harvard University · US

Funding

NKX2-1 Enhancer Amplification and Lineage Addiction in Lung AdenocarcinomaR35CA197568 · NCI · DANA-FARBER CANCER INST · PI Matthew L. Meyerson · 2015 to 2026
$12.4M
Harvard Clinical and Translational Science CenterKL2TR001100 · NCATS · HARVARD MEDICAL SCHOOL · PI NADLER, LEE MARSHALL · 2013 to 2017
$8.5M
The Dana-Farber Cancer Institute Cancer Target Discovery and Development CenterU01CA176058 · NCI · DANA-FARBER CANCER INST · PI HAHN, WILLIAM C. · 2013 to 2021
$7.8M
Investigating the role of KLF5 genomic alterations in tumorigenesisR00CA215244 · NCI · UNIVERSITY OF UTAH · PI ZHANG, XIAOYANG · 2019 to 2021
$742k
Investigating the role of KLF5 genomic alterations in tumorigenesisK99CA215244 · NCI · DANA-FARBER CANCER INST · PI ZHANG, XIAOYANG · 2017 to 2018
$267k
Investigating the role of RBM10-regulated alternative splicing in lung tumorigenesisK99CA208028 · NCI · DANA-FARBER CANCER INST · PI CHOI, PETER S. · 2016 to 2017
$266k
NCATS NIH HHS KL2 TR001100NCI NIH HHS K99 CA208028NCI NIH HHS K99 CA215244NCI NIH HHS R00 CA215244NCI NIH HHS R35 CA197568NCI NIH HHS U01 CA176058
6 · The paper itself

Abstract

The Krüppel-like family of transcription factors plays critical roles in human development and is associated with cancer pathogenesis. Krüppel-like factor 5 gene (

Indexed as

MutationOncogenesCell ProliferationHumansKruppel-Like Transcription FactorsKLF5 protein, humanKruppel-Like Transcription Factors

Identifiers

PMID28963353
PMCPMC5760289
OpenAlexW2758929914

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.