Evidence map›Paper›PMID 28961247›Full record

ArticlePLoS genetics2017

Functional divergence of chloroplast Cpn60α subunits during Arabidopsis embryo development.

Xiaolong Ke, Wenxuan Zou, Yafang Ren, Zhiqin Wang, Jin Li, Xuan Wu, Jie Zhao

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. OsCpn60β1 is Essential for Chloroplast Development in Rice (International journal of molecular sciences · 2020
    Article
  10. Article
  11. Enhancing oil production inBiotechnology for biofuels · 2019
    Article
  12. Article
  13. Article
  14. Reconstitution of Pure Chaperonin Hetero-Oligomer PreparationsFrontiers in molecular biosciences · 2018
    Article
  15. Rubisco Assembly in the Chloroplast.Frontiers in molecular biosciences · 2018
    Review
  16. Frontiers in plant science · 2018
    Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Xiaolong KeState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Wenxuan ZouState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Yafang RenState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Zhiqin WangState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Jin LiState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Xuan WuState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Jie ZhaoState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.ORCID http://orcid.org/0000-0002-7622-8904
Wuhan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chaperonins are a class of molecular chaperones that assist in the folding and assembly of a wide range of substrates. In plants, chloroplast chaperonins are composed of two different types of subunits, Cpn60α and Cpn60β, and duplication of Cpn60α and Cpn60β genes occurs in a high proportion of plants. However, the importance of multiple Cpn60α and Cpn60β genes in plants is poorly understood. In this study, we found that loss-of-function of CPNA2 (AtCpn60α2), a gene encoding the minor Cpn60α subunit in Arabidopsis thaliana, resulted in arrested embryo development at the globular stage, whereas the other AtCpn60α gene encoding the dominant Cpn60α subunit, CPNA1 (AtCpn60α1), mainly affected embryonic cotyledon development at the torpedo stage and thereafter. Further studies demonstrated that CPNA2 can form a functional chaperonin with CPNB2 (AtCpn60β2) and CPNB3 (AtCpn60β3), while the functional partners of CPNA1 are CPNB1 (AtCpn60β1) and CPNB2. We also revealed that the functional chaperonin containing CPNA2 could assist the folding of a specific substrate, KASI (β-ketoacyl-[acyl carrier protein] synthase I), and that the KASI protein level was remarkably reduced due to loss-of-function of CPNA2. Furthermore, the reduction in the KASI protein level was shown to be the possible cause for the arrest of cpna2 embryos. Our findings indicate that the two Cpn60α subunits in Arabidopsis play different roles during embryo development through forming distinct chaperonins with specific AtCpn60β to assist the folding of particular substrates, thus providing novel insights into functional divergence of Cpn60α subunits in plants.

Indexed as

Gene Expression Regulation, PlantGenes, Plant3-Oxoacyl-(Acyl-Carrier-Protein) SynthaseAcyl Carrier ProteinAmino Acid SequenceArabidopsisArabidopsis ProteinsChaperoninsChloroplastsCloning, MolecularCotyledonGene DuplicationProtein ConformationSeedlingsTandem Mass Spectrometry3-Oxoacyl-(Acyl-Carrier-Protein) SynthaseAcyl Carrier ProteinArabidopsis ProteinsChaperonins

Identifiers

PMID28961247
PMCPMC5636168
OpenAlexW2759967480

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.