Evidence map›Paper›PMID 28959349›Full record

ArticleIranian journal of biotechnology2017

Computational Identification of MicroRNAs and Their Transcript Target(s) in Field Mustard (

Behzad Hajieghrari, Naser Farrokhi, Bahram Goliaei, Kaveh Kavousi

Open access · bronzeAbstract read
In one paragraph

Article in Iranian journal of biotechnology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Behzad HajieghrariDepartment of Bioinformatics, Institute of Biochemistry and Biophysics (IBB), University of Tehran, Tehran, 13145-1365, Iran.
Naser FarrokhiDepartment of Biotechnology Engineering, Faculty of Energy Engineering and New Technologies, Shahid Beheshti University G.C., Evin, Tehran,19839-4716, Iran.
Bahram GoliaeiDepartments of Biophysics and Bioinformatics laboratories, Institute of Biochemistry and Biophysics (IBB), University of Tehran, Tehran,13145-1365, Iran.
Kaveh KavousiLaboratory of Complex Biological Systems and Bioinformatics (CBB), Institute of Biochemistry and Biophysics (IBB), University of Tehran, Tehran, 13145-1365, Iran.
University of Tehran · IRJahrom University · IRShahid Beheshti University · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMicro RNAs (miRNAs) are a pivotal part of non-protein-coding endogenous small RNA molecules that regulate the genes involved in plant growth and development, and respond to biotic and abiotic environmental stresses posttranscriptionally.

objectiveIn the present study, we report the results of a systemic search for identification of new miRNAs in MATERIALS AND

methodsPlant mature miRNA sequences were searched in non-protein coding ESTs registered in NCBI EST database. Zuker RNA folding algorithm was used to generate the secondary structures of the ESTs. Potential sequences were candidate as miRNA genes and characterized evolutionarily only and if only they fi t some described criteria. Also, the web tool psRNATarget was applied to predict candidate

resultsIn this study, 10 novel miRNAs from

conclusionsMicroRNA having diverse functions in plant species growth, development and evolution by posttranscriptionally regulating the levels of specific transcriptome so by effecting on their translation products. Research in miRNA led to the identification of many miRNAs and their regulating genes from diverse plant species.

Indexed as

Brassica rapaExpressed sequence tagHomology searchMicroRNANon-protein coding RNA

Identifiers

PMID28959349
PMCPMC5582250
OpenAlexW2605439528

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.