Evidence map›Paper›PMID 28958990›Full record

ArticleMolecular cancer therapeutics2017

CRISPR Genome-Wide Screening Identifies Dependence on the Proteasome Subunit PSMC6 for Bortezomib Sensitivity in Multiple Myeloma.

Chang-Xin Shi, K Martin Kortüm, Yuan Xiao Zhu, Laura A Bruins, Patrick Jedlowski, Patrick G Votruba, Moulun Luo, Robert A Stewart, Jonathan Ahmann, Esteban Braggio and 1 more

Open access · greenAbstract read
In one paragraph

Article in Molecular cancer therapeutics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 58 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Chang-Xin ShiDepartment of Hematology, Mayo Clinic in Arizona, Scottsdale, Arizona.
K Martin KortümDepartment of Hematology, Mayo Clinic in Arizona, Scottsdale, Arizona.
Yuan Xiao ZhuDepartment of Hematology, Mayo Clinic in Arizona, Scottsdale, Arizona.
Laura A BruinsDepartment of Hematology, Mayo Clinic in Arizona, Scottsdale, Arizona.
Patrick JedlowskiDepartment of Hematology, Mayo Clinic in Arizona, Scottsdale, Arizona.
Patrick G VotrubaBioinformatics Systems, Mayo Clinic in Arizona, Scottsdale, Arizona.
Moulun LuoMayo/ASU Center for Metabolic and Vascular Biology, Arizona State University, Scottsdale, Arizona.
Robert A StewartDepartment of Hematology, Mayo Clinic in Arizona, Scottsdale, Arizona.
Jonathan AhmannDepartment of Hematology, Mayo Clinic in Arizona, Scottsdale, Arizona.
Esteban BraggioDepartment of Hematology, Mayo Clinic in Arizona, Scottsdale, Arizona.
A Keith StewartDepartment of Hematology, Mayo Clinic in Arizona, Scottsdale, Arizona. stewart.keith@mayo.edu.
Mayo Clinic in Arizona · USArizona State University · USMayo Clinic · US

Funding

Project 4: Targeting Resistance to T-Cell Directed Therapy in Multiple MyelomaP50CA186781 · NCI · MAYO CLINIC ARIZONA · PI Amylou Constance Dueck · 2015 to 2026
$25.5M
The Role of Cereblon Pathways in MyelomaR01CA183968 · NCI · MAYO CLINIC ARIZONA · PI KUMAR, SHAJI KUNNATHU, STEWART, ALEXANDER KEITH · 2014 to 2018
$2.3M
The Molecular Basis for Bortezomib ActivityR01CA129009 · NCI · MAYO CLINIC ARIZONA · PI STEWART, ALEXANDER KEITH · 2007 to 2011
$1.5M
NCI NIH HHS P50 CA186781NCI NIH HHS R01 CA129009NCI NIH HHS R01 CA183968
6 · The paper itself

Abstract

Bortezomib is highly effective in the treatment of multiple myeloma; however, emergent drug resistance is common. Consequently, we employed CRISPR targeting 19,052 human genes to identify unbiased targets that contribute to bortezomib resistance. Specifically, we engineered an RPMI8226 multiple myeloma cell line to express Cas9 infected by lentiviral vector CRISPR library and cultured derived cells in doses of bortezomib lethal to parental cells. Sequencing was performed on surviving cells to identify inactivated genes responsible for drug resistance. From two independent whole-genome screens, we selected 31 candidate genes and constructed a second CRISPR sgRNA library, specifically targeting each of these 31 genes with four sgRNAs. After secondary screening for bortezomib resistance, the top 20 "resistance" genes were selected for individual validation. Of these 20 targets, the proteasome regulatory subunit PSMC6 was the only gene validated to reproducibly confer bortezomib resistance. We confirmed that inhibition of chymotrypsin-like proteasome activity by bortezomib was significantly reduced in cells lacking PSMC6. We individually investigated other members of the PSMC group (PSMC1 to 5) and found that deficiency in each of those subunits also imparts bortezomib resistance. We found 36 mutations in 19S proteasome subunits out of 895 patients in the IA10 release of the CoMMpass study (https://themmrf.org). Our findings demonstrate that the PSMC6 subunit is the most prominent target required for bortezomib sensitivity in multiple myeloma cells and should be examined in drug-refractory populations.

Indexed as

Antineoplastic AgentsBortezomibClustered Regularly Interspaced Short Palindromic RepeatsHumansMultiple MyelomaProteasome Endopeptidase ComplexAntineoplastic AgentsBortezomibProteasome Endopeptidase Complex

Identifiers

PMID28958990
PMCPMC5796678
OpenAlexW2759270106

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.