Evidence map›Paper›PMID 28957465›Full record

ArticleGenome biology and evolution2017

Alu Insertion Polymorphisms as Evidence for Population Structure in Baboons.

Cody J Steely, Jerilyn A Walker, Vallmer E Jordan, Thomas O Beckstrom, Cullen L McDaniel, Corey P St Romain, Emily C Bennett, Arianna Robichaux, Brooke N Clement, Muthuswamy Raveendran and 7 more

Open access · goldAbstract read
In one paragraph

Article in Genome biology and evolution, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 1 country.

Cody J SteelyDepartment of Biological Sciences, Louisiana State University.
Jerilyn A WalkerDepartment of Biological Sciences, Louisiana State University.
Vallmer E JordanDepartment of Biological Sciences, Louisiana State University.
Thomas O BeckstromDepartment of Biological Sciences, Louisiana State University.
Cullen L McDanielDepartment of Biological Sciences, Louisiana State University.
Corey P St RomainDepartment of Biological Sciences, Louisiana State University.
Emily C BennettDepartment of Biological Sciences, Louisiana State University.
Arianna RobichauxDepartment of Biological Sciences, Louisiana State University.
Brooke N ClementDepartment of Biological Sciences, Louisiana State University.
Muthuswamy RaveendranHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas.
Baboon Genome Analysis Consortium
Kim C WorleyHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas.
Jane Phillips-ConroyDepartment of Neuroscience, Washington University, St. Louis.
Clifford J JollyDepartment of Anthropology, New York University.
Jeff RogersHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas.
Miriam K KonkelDepartment of Biological Sciences, Louisiana State University.
Mark A BatzerDepartment of Biological Sciences, Louisiana State University.
Louisiana State University · USBaylor College of Medicine · USBaylor Genetics · USNew York University · USWashington University in St. Louis · US

Funding

STABILITY' (symptomatic review during biologic therapy) Review in Inflammatory Bowel DiseaseP20GM103424 · NIGMS · LOUISIANA STATE UNIV A&M COL BATON ROUGE · PI Konstantin G Kousoulas · 2012 to 2026
$57.4M
POPULATION GENETICS OF MOBILE ELEMENTSR01GM059290 · NIGMS · UNIVERSITY OF UTAH · PI BATZER, MARK A, FESCHOTTE, CEDRIC · 1999 to 2018
$8.5M
Biomedical Research Experience for Veterinary StudentsT35OD011151 · OD · LOUISIANA STATE UNIV A&M COL BATON ROUGE · PI MARTINEZ, JUAN J · 2012 to 2023
$681k
NIGMS NIH HHS P20 GM103424NIGMS NIH HHS R01 GM059290NIH HHS T35 OD011151
6 · The paper itself

Abstract

Male dispersal from the natal group at or near maturity is a feature of most baboon (Papio) species. It potentially has profound effects upon population structure and evolutionary processes, but dispersal, especially for unusually long distances, is not readily documented by direct field observation. In this pilot study, we investigate the possibility of retrieving baboon population structure in yellow (Papio cynocephalus) and kinda (Papio kindae) baboons from the distribution of variation in a genome-wide set of 494 Alu insertion polymorphisms, made available via the recently completed Baboon Genome Analysis Consortium. Alu insertion variation in a mixed population derived from yellow and olive (Papio anubis) baboons identified each individual's proportion of heritage from either parental species. In an unmixed yellow baboon population, our analysis showed greater similarity between neighboring than between more distantly situated groups, suggesting structuring of the population by male dispersal distance. Finally (and very provisionally), an unexpectedly sharp difference in Alu insertion frequencies between members of neighboring social groups of kinda baboons suggests that intergroup migration may be more rare than predicted in this little known species.

Indexed as

Alu ElementsPolymorphism, GeneticAnimalsEvolution, MolecularFemaleGenomeMalePapioPhylogenyAlupopulation geneticspopulation structureretrotransposon

Identifiers

PMID28957465
PMCPMC5622324
OpenAlexW2794996231

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.