Evidence map›Paper›PMID 28957450›Full record

ArticlePloS one2017

Pleiotropy of genetic variants on obesity and smoking phenotypes: Results from the Oncoarray Project of The International Lung Cancer Consortium.

Tao Wang, Jee-Young Moon, Yiqun Wu, Christopher I Amos, Rayjean J Hung, Adonina Tardon, Angeline Andrew, Chu Chen, David C Christiani, Demetrios Albanes and 28 more

Abstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Article
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  8. A powerful and versatile colocalization test.PLoS computational biology · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

38 authors.

Tao WangDepartment of Epidemiology & Population Health, Albert Einstein College of Medicine, Bronx, New York, United States of America.
Jee-Young MoonDepartment of Epidemiology & Population Health, Albert Einstein College of Medicine, Bronx, New York, United States of America.ORCID http://orcid.org/0000-0001-9218-8335
Yiqun WuDepartment of Epidemiology & Population Health, Albert Einstein College of Medicine, Bronx, New York, United States of America.ORCID http://orcid.org/0000-0002-5554-1678
Christopher I AmosCommunity and Family Medicine, Geisel School of Medicine, Dartmouth College, Hanover, New Hampshire, United States of America.
Rayjean J HungLunenfeld-Tanenbaum Research Institute, Sinai Health System; Division of Epidemiology, Dalla Lana School of Public Health, University of Toronto, Toronto, Ontario, Canada.ORCID http://orcid.org/0000-0002-4486-7496
Adonina TardonIUOPA. University of Oviedo and CIBERESP. Oviedo, Spain.
Angeline AndrewNorris Cotton Cancer Center, Hanover, New Hampshire, United States of America.
Chu ChenFred Hutchinson Cancer Research Center, Seattle, Washington, United States of America.
David C ChristianiHarvard School of Public Health, Boston, Massachusetts, United States of America.ORCID http://orcid.org/0000-0002-0301-0242
Demetrios AlbanesNational Cancer Institute, Bethesda, United States of America.
Erik H F M van der HeijdenRadboud university medical center, Nijmegen, Netherlands.ORCID http://orcid.org/0000-0003-3596-518X
Eric DuellCatalan Institute of Oncology (ICO), Barcelona, Spain.
Gadi RennertCarmel Medical Center, Haifa, Israel.
Gary GoodmanFred Hutchinson Cancer Research Center, Seattle, Washington, United States of America.
Geoffrey LiuLunenfeld-Tanenbaum Research Institute, Sinai Health System; Division of Epidemiology, Dalla Lana School of Public Health, University of Toronto, Toronto, Ontario, Canada.
James D MckayInternational Agency for Research on Cancer (IARC), Lyon, France.
Jian-Min YuanUniversity of Pittsburgh Cancer Institute, Pittsburgh, Pennsylvania, United States of America.
John K FieldRoy Castle Lung Cancer Research Programme, Department of Molecular & Clinical Cancer Medicine, The University of Liverpool, Liverpool, UK.ORCID http://orcid.org/0000-0003-3951-6365
Jonas ManjerDepartment of surgery, Unit for breast surgery, Lund University, Malmö, Skåne University Hospital Malmö, Malmö, Sweden.
Kjell GrankvistDepartment of Medical Biosciences, Umeå University, Umeå, Sweden.
Lambertus A KiemeneyRadboud university medical center, Nijmegen, Netherlands.ORCID http://orcid.org/0000-0002-2368-1326
Loic Le MarchandUniversity of Hawaii Cancer Center, Honolulu, Hawai'I, United States of America.
M Dawn TeareUniversity Of Sheffield, Sheffield, South Yorkshire, United Kingdom.
Matthew B SchabathDepartment of Cancer Epidemiology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida, United States of America.ORCID http://orcid.org/0000-0003-3241-3216
Mattias JohanssonInternational Agency for Research on Cancer (IARC), Lyon, France.
Melinda C AldrichDepartment of Thoracic Surgery, Division of Epidemiology, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America.
Michael DaviesRoy Castle Lung Cancer Research Programme, Department of Molecular & Clinical Cancer Medicine, The University of Liverpool, Liverpool, UK.
Mikael JohanssonDepartment of Medical Biosciences, Umeå University, Umeå, Sweden.
Ming-Sound TsaoPrincess Margaret Cancer Center, Toronto, Ontario, Canada.
Neil CaporasoNational Cancer Institute, Bethesda, United States of America.
Philip LazarusWashington State University College of Pharmacy, Washington, United States of America.
Stephen LamBritish Columbia Cancer Agency, Vancouver, British Columbia, Canada.
Stig E BojesenCopenhagen General Population Study, Herlev and Gentofte Hospital, Copenhagen, Denmark.
Susanne ArnoldMarkey Cancer Center, Lexington, Kentucky, United States of America.ORCID http://orcid.org/0000-0001-6542-9551
Xifeng WuThe University of Texas MD Anderson Cancer Center, Texas, Houston, United States of America.
Xuchen ZongLunenfeld-Tanenbaum Research Institute, Sinai Health System; Division of Epidemiology, Dalla Lana School of Public Health, University of Toronto, Toronto, Ontario, Canada.
Yun-Chul HongDepartment of Preventive Medicine, Seoul National University College of Medicine, Seoul, Korea.
Gloria Y F HoMerinoff Center for Patient-Oriented Research, The Feinstein Institute for Medical Research, New York, United States of America.

Funding

Translational Engineering in Cancer (TEC)P30CA023108 · NCI · DARTMOUTH COLLEGE · PI Fred W Kolling IV · 1985 to 2026
$91.3M
Translational Research CoreP30DK020541 · NIDDK · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI JEFFREY E. PESSIN · 2015 to 2026
$27.7M
Alpha-Tocopherol, Beta-Carotene Cancer Prevention (ATBC) StudyZIACP010195 · NCI · DIVISION OF CANCER EPIDEMIOLOGY AND GENETICS · PI ALBANES, DEMETRIUS · 2009 to 2025
$22.5M
Statistical Methods for Analysis of Massive Genetic and Genomic Data in Cancer ResearchR35CA197449 · NCI · HARVARD UNIVERSITY D/B/A HARVARD SCHOOL OF PUBLIC HEALTH · PI XIHONG LIN · 2015 to 2026
$10.9M
INFRASRUCTURE SUPPORT AND DATA ENHANCEMENTS FOR THE CARET BIOREPOSITORYUM1CA167462 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GOODMAN, GARY E · 2013 to 2017
$2.8M
Unraveling Genetic Determinants of Lung Cancer Risk in African AmericansK07CA172294 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI ALDRICH, MELINDA · 2013 to 2017
$801k
Develop and Apply a Novel Genome-wide Mendelian Randomization Method to Examine Relationship between Obesity and Lung CancerR21CA202529 · NCI · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI HO, GLORIA YUEN FUN, WANG, TAO · 2016 to 2017
$408k
NCI NIH HHS K07 CA172294NCI NIH HHS P30 CA023108NCI NIH HHS R21 CA202529NCI NIH HHS R35 CA197449NCI NIH HHS UM1 CA167462NIDDK NIH HHS P30 DK020541World Health Organization 001
6 · The paper itself

Abstract

Obesity and cigarette smoking are correlated through complex relationships. Common genetic causes may contribute to these correlations. In this study, we selected 241 loci potentially associated with body mass index (BMI) based on the Genetic Investigation of ANthropometric Traits (GIANT) consortium data and calculated a BMI genetic risk score (BMI-GRS) for 17,037 individuals of European descent from the Oncoarray Project of the International Lung Cancer Consortium (ILCCO). Smokers had a significantly higher BMI-GRS than never-smokers (p = 0.016 and 0.010 before and after adjustment for BMI, respectively). The BMI-GRS was also positively correlated with pack-years of smoking (p<0.001) in smokers. Based on causal network inference analyses, seven and five of 241 SNPs were classified to pleiotropic models for BMI/smoking status and BMI/pack-years, respectively. Among them, three and four SNPs associated with smoking status and pack-years (p<0.05), respectively, were followed up in the ever-smoking data of the Tobacco, Alcohol and Genetics (TAG) consortium. Among these seven candidate SNPs, one SNP (rs11030104, BDNF) achieved statistical significance after Bonferroni correction for multiple testing, and three suggestive SNPs (rs13021737, TMEM18; rs11583200, ELAVL4; and rs6990042, SGCZ) achieved a nominal statistical significance. Our results suggest that there is a common genetic component between BMI and smoking, and pleiotropy analysis can be useful to identify novel genetic loci of complex phenotypes.

Indexed as

Polymorphism, Single NucleotideAgedBody Mass IndexFemaleHumansMaleMiddle AgedObesityPhenotypeSmoking

Identifiers

PMID28957450
PMCPMC5619832

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.