Evidence map›Paper›PMID 28957325›Full record

ArticlePLoS computational biology2017

Interactions between the tumor and the blood systemic response of breast cancer patients.

Vanessa Dumeaux, Bjørn Fjukstad, Hans E Fjosne, Jan-Ole Frantzen, Marit Muri Holmen, Enno Rodegerdts, Ellen Schlichting, Anne-Lise Børresen-Dale, Lars Ailo Bongo, Eiliv Lund and 1 more

2 registry-linked trialsAbstract read
In one paragraph

Article in PLoS computational biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 2 registered trials, which are not on this map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04941365 nawithdrawnnot on this mapstarted 2022, after this paper: background citation

Quantifying Systemic Immunosuppression to Personalize Cancer Therapy

TypeinterventionalSponsorInstitut du Cancer de Montpellier - Val d'AurelleRan2022 to 2024Enrolled0ConditionsMetastatic Melanoma, Metastatic Breast Cancer, Advanced Renal Cell Carcinoma, Squamous Cell Carcinoma of Head and NeckArmssingle arm
NCT05621837 recruitingnot on this mapstarted 2022, after this paper: background citation

Quantifying Systemic Immunosuppression to Personalize Cancer Therapy

TypeobservationalSponsorFondazione IRCCS Istituto Nazionale dei Tumori, MilanoRan2022 to 2026Enrolled1,000ConditionsMelanoma, Breast Cancer, Renal Cell Carcinoma, Urinary Bladder CancerArmsMDSC quantification
3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Vanessa DumeauxDepartment of Biology, Concordia University, Montreal, QC, Canada.ORCID http://orcid.org/0000-0002-9904-8092
Bjørn FjukstadDepartment of Computer Science, UiT the Arctic University of Norway, Tromsø, Norway.
Hans E FjosneDepartment of Surgery, St. Olavs University Hospital, Trondheim, Norway.
Jan-Ole FrantzenUniversity Hospital of North-Norway, Narvik, Norway.
Marit Muri HolmenDepartment of Radiology and Nuclear Medicine, Oslo University Hospital, Oslo, Norway.ORCID http://orcid.org/0000-0003-2803-4117
Enno RodegerdtsNordland Central Hospital, Bodø, Norway.
Ellen SchlichtingDepartment of Cancer, Oslo University Hospital, Oslo, Norway.
Anne-Lise Børresen-DaleDepartment of Cancer Genetics, Oslo University Hospital, Oslo, Norway.
Lars Ailo BongoDepartment of Computer Science, UiT the Arctic University of Norway, Tromsø, Norway.ORCID http://orcid.org/0000-0002-7544-2482
Eiliv LundInstitute of Community Medicine, UiT the Arctic University of Norway, Tromsø, Norway.ORCID http://orcid.org/0000-0002-8071-8711
Michael HallettDepartment of Biology, Concordia University, Montreal, QC, Canada.ORCID http://orcid.org/0000-0001-6738-6786

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although systemic immunity is critical to the process of tumor rejection, cancer research has largely focused on immune cells in the tumor microenvironment. To understand molecular changes in the patient systemic response (SR) to the presence of BC, we profiled RNA in blood and matched tumor from 173 patients. We designed a system (MIxT, Matched Interactions Across Tissues) to systematically explore and link molecular processes expressed in each tissue. MIxT confirmed that processes active in the patient SR are especially relevant to BC immunogenicity. The nature of interactions across tissues (i.e. which biological processes are associated and their patterns of expression) varies highly with tumor subtype. For example, aspects of the immune SR are underexpressed proportionally to the level of expression of defined molecular processes specific to basal tumors. The catalog of subtype-specific interactions across tissues from BC patients provides promising new ways to tackle or monitor the disease by exploiting the patient SR.

Indexed as

Biomarkers, TumorBlood CellsBreast NeoplasmsCase-Control StudiesCellular MicroenvironmentFemaleGene Expression ProfilingGenomicsHumansMiddle AgedSignal TransductionSystems BiologyTumor MicroenvironmentBiomarkers, Tumor

Identifiers

PMID28957325
PMCPMC5619688

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.