Evidence map›Paper›PMID 28956770›Full record

ArticleJournal of virology2017

Genome-Wide Mutagenesis of Dengue Virus Reveals Plasticity of the NS1 Protein and Enables Generation of Infectious Tagged Reporter Viruses.

Nicholas S Eyre, Stephen M Johnson, Auda A Eltahla, Maria Aloi, Amanda L Aloia, Christopher A McDevitt, Rowena A Bull, Michael R Beard

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 37 citations in OpenAlex.

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  7. AntiviralmBio · 2024
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  19. Journal of virology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Nicholas S EyreResearch Centre for Infectious Diseases, School of Biological Sciences, University of Adelaide, Adelaide, Australia nicholas.eyre@adelaide.edu.au michael.beard@adelaide.edu.au.
Stephen M JohnsonResearch Centre for Infectious Diseases, School of Biological Sciences, University of Adelaide, Adelaide, Australia.
Auda A EltahlaViral Immunology Systems Program, School of Medical Sciences, The Kirby Institute, UNSW, Sydney, Australia.
Maria AloiResearch Centre for Infectious Diseases, School of Biological Sciences, University of Adelaide, Adelaide, Australia.
Amanda L AloiaCell Screen SA, Flinders Centre for Innovation in Cancer, Flinders University, Bedford Park, Australia.
Christopher A McDevittResearch Centre for Infectious Diseases, School of Biological Sciences, University of Adelaide, Adelaide, Australia.
Rowena A BullViral Immunology Systems Program, School of Medical Sciences, The Kirby Institute, UNSW, Sydney, Australia.
Michael R BeardResearch Centre for Infectious Diseases, School of Biological Sciences, University of Adelaide, Adelaide, Australia nicholas.eyre@adelaide.edu.au michael.beard@adelaide.edu.au.
University of Adelaide · AUCentre for Cancer Biology · AUFlinders University · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Dengue virus (DENV) is a major global pathogen that causes significant morbidity and mortality in tropical and subtropical areas worldwide. An improved understanding of the regions within the DENV genome and its encoded proteins that are required for the virus replication cycle will expedite the development of urgently required therapeutics and vaccines. We subjected an infectious DENV genome to unbiased insertional mutagenesis and used next-generation sequencing to identify sites that tolerate 15-nucleotide insertions during the virus replication cycle in hepatic cell culture. This revealed that the regions within capsid, NS1, and the 3' untranslated region were the most tolerant of insertions. In contrast, prM- and NS2A-encoding regions were largely intolerant of insertions. Notably, the multifunctional NS1 protein readily tolerated insertions in regions within the

Indexed as

Genome, ViralMutagenesis, InsertionalCell LineDengue VirusDNA-(Apurinic or Apyrimidinic Site) LyaseEndonucleasesHigh-Throughput Nucleotide SequencingHumansMicroscopy, ElectronMultifunctional EnzymesRNA, ViralViral Nonstructural ProteinsVirus ReplicationAPEX2 protein, humanDNA-(Apurinic or Apyrimidinic Site) LyaseEndonucleasesMultifunctional EnzymesNS1 protein, Dengue virus type 2RNA, ViralViral Nonstructural Proteinsdengue viruselectron microscopymutagenesisNS1virus assemblyvirus replication

Identifiers

PMID28956770
PMCPMC5686748
OpenAlexW2758833021

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.