Evidence map›Paper›PMID 28955999›Full record

ArticleBiochemistry and biophysics reports2017

A novel human glucocorticoid receptor SNP results in increased transactivation potential.

Tajia L Green, Kelly Tung, Debora Lim, Stacey M Leventhal, Kiho Cho, David G Greenhalgh

Open access · goldAbstract read
In one paragraph

Article in Biochemistry and biophysics reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Tajia L GreenShriners Hospitals for Children Northern California, and Department of Surgery, University of California, Davis, Sacramento, CA 95817, USA.
Kelly TungShriners Hospitals for Children Northern California, and Department of Surgery, University of California, Davis, Sacramento, CA 95817, USA.
Debora LimShriners Hospitals for Children Northern California, and Department of Surgery, University of California, Davis, Sacramento, CA 95817, USA.
Stacey M LeventhalShriners Hospitals for Children Northern California, and Department of Surgery, University of California, Davis, Sacramento, CA 95817, USA.
Kiho ChoShriners Hospitals for Children Northern California, and Department of Surgery, University of California, Davis, Sacramento, CA 95817, USA.
David G GreenhalghShriners Hospitals for Children Northern California, and Department of Surgery, University of California, Davis, Sacramento, CA 95817, USA.
Shriners Hospitals for Children - Northern California · USUniversity of California, Davis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glucocorticoids are one of the most widely used therapeutics in the treatment of a variety of inflammatory disorders. However, it is known that there are variable patient responses to glucocorticoid treatment; there are responders and non-responders, or those that need higher dosages. Polymorphisms in the glucocorticoid receptor (GR) have been implicated in this variability. In this study, ninety-seven volunteers were surveyed for polymorphisms in the human GR-alpha (hGRα), the accepted biologically active reference isoform. One isoform identified in our survey, named hGR DL-2, had four single nucleotide polymorphisms (SNPs), one synonymous and three non-synonymous, and a four base pair deletion resulting in a frame shift and early termination to produce a 743 amino acid putative protein. hGR DL-2 had a decrease in transactivation potential of more than 90%. Upon further analysis of the individual SNPs and deletion, one SNP, A829G, which results in a lysine to glutamic acid amino acid change at position 277, was found to increase the transactivation potential of hGR more than eight times the full-length reference. Furthermore, the hGRα-A829G isoform had a differential hyperactive response to various exogenous steroids. Increasing our knowledge as to how various SNPs affect hGR activity may help in understanding the unpredictable patient response to steroid treatment, and is a step towards personalizing patient care.

Indexed as

Glucocorticoid ReceptorHyperactive IsoformSingle Nucleotide PolymorphismSteroid ResponseStress Response

Identifiers

PMID28955999
PMCPMC5614576
OpenAlexW2567569680

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.