ArticleFrontiers in plant science2017
Testing Domestication Scenarios of Lima Bean (
Article in Frontiers in plant science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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16 citing papers in PubMed, 48 citations in OpenAlex.
- Novel quantitative trait loci conferring resistance to root-knot nematodes in lima bean (Molecular breeding : new strategies in plant improvement · 2026Article
- GermVersity: A free and user-friendly interface to enhance the visualization and analysis of genebank data.PloS one · 2026Article
- Genome-wide discovery of short sequence repeat markers useful for genetic diversity studies in Lima bean (Phaseolus lunatus L.).Scientific reports · 2025Article
- Consistent effects of independent domestication events on the plant microbiota.Current biology : CB · 2024Article
- Selection signatures and population dynamics of transposable elements in lima bean.Communications biology · 2023Article
- Trans-Holocene Bayesian chronology for tree and field crop use from El Gigante rockshelter, Honduras.PloS one · 2023Article
- Advancing Grain Legumes Domestication and Evolution Studies with Genomics.Plant & cell physiology · 2022Review
- Heterogeneous effects of climatic conditions on Andean bean landraces and cowpeas highlight alternatives for crop management and conservation.Scientific reports · 2022Article
- Consequences of introgression and gene flow on the genetic structure and diversity of Lima bean (PeerJ · 2022Article
- Pod shattering in grain legumes: emerging genetic and environment-related patterns.The Plant cell · 2021Review
- Article
- Chloroplast genome sequence of Chongming lima bean (Phaseolus lunatus L.) and comparative analyses with other legume chloroplast genomes.BMC genomics · 2021Article
- Comprehensive genomic resources related to domestication and crop improvement traits in Lima bean.Nature communications · 2021Article
- DNA methylation in canine brains is related to domestication and dog-breed formation.PloS one · 2020Article
- Mutation dynamics of CpG dinucleotides during a recent event of vertebrate diversification.Epigenetics · 2019Article
- Does the Genomic Landscape of Species Divergence inFrontiers in plant science · 2018Article
Corrections and comments
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Authors and funding
2 authors at 2 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Plant domestication can be seen as a long-term process that involves a complex interplay among demographic processes and evolutionary forces. Previous studies have suggested two domestication scenarios for Lima bean in Mesoamerica: two separate domestication events, one from gene pool MI in central-western Mexico and another one from gene pool MII in the area Guatemala-Costa Rica, or a single domestication from gene pool MI in central-western Mexico followed by post-domestication gene flow with wild populations. In this study we evaluated the genetic structure of the wild gene pool and tested these two competing domestication scenarios of Lima bean in Mesoamerica by applying an ABC approach to a set of genome-wide SNP markers. The results confirm the existence of three gene pools in wild Lima bean, two Mesoamerican gene pools (MI and MII) and the Andean gene pool (AI), and suggest the existence of another gene pool in central Colombia. The results indicate that although both domestication scenarios may be supported by genetic data, higher statistical support was given to the single domestication scenario in central-western Mexico followed by admixture with wild populations. Domestication would have involved strong founder effects reflected in loss of genetic diversity and increased LD levels in landraces. Genomic regions affected by selection were detected and these may harbor candidate genes related to domestication.
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