Evidence map›Paper›PMID 28954229›Full record

ArticleCell reports2017

Microprocessor Recruitment to Elongating RNA Polymerase II Is Required for Differential Expression of MicroRNAs.

Victoria A Church, Sigal Pressman, Mamiko Isaji, Mary Truscott, Nihal Terzi Cizmecioglu, Stephen Buratowski, Maxim V Frolov, Richard W Carthew

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
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  8. Article
  9. Review
  10. Parameters of clustered suboptimal miRNA biogenesis.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. MicroRNAs: From Mechanism to Organism.Frontiers in cell and developmental biology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Victoria A ChurchDepartment of Molecular Biosciences, Northwestern University, Evanston, IL 60208, USA.
Sigal PressmanDepartment of Molecular Biosciences, Northwestern University, Evanston, IL 60208, USA.
Mamiko IsajiDepartment of Molecular Biosciences, Northwestern University, Evanston, IL 60208, USA.
Mary TruscottDepartment of Biochemistry and Molecular Genetics, University of Illinois, Chicago, IL 60607, USA.
Nihal Terzi CizmeciogluDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA; Middle East Technical University, Department of Biological Sciences, 06800, Ankara, Turkey.
Stephen BuratowskiDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA.
Maxim V FrolovDepartment of Biochemistry and Molecular Genetics, University of Illinois, Chicago, IL 60607, USA.
Richard W CarthewDepartment of Molecular Biosciences, Northwestern University, Evanston, IL 60208, USA. Electronic address: r-carthew@northwestern.edu.
Northwestern University · USUniversity of Illinois Chicago · USHarvard University · USMiddle East Technical University · TR

Funding

CELLULAR &MOLECULAR BASIS OF DISEASE TRAINING PROGRAMT32GM008061 · NIGMS · NORTHWESTERN UNIVERSITY · PI CARTHEW, RICHARD W. · 1985 to 2022
$17.1M
The RNA Polymerase II Transcription CycleR01GM056663 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI Stephen Buratowski · 1999 to 2026
$11.7M
Non-coding RNAs and their mechanisms and functions-RenewalR35GM118144 · NIGMS · NORTHWESTERN UNIVERSITY · PI Richard W. CARTHEW · 2016 to 2026
$6.8M
Molecular Mechanisms of Gene Silencing by RNAiR01GM068743 · NIGMS · NORTHWESTERN UNIVERSITY · PI CARTHEW, RICHARD W. · 2003 to 2014
$4.1M
MicroRNA Regulation of Biological MechanismsR01GM077581 · NIGMS · NORTHWESTERN UNIVERSITY · PI CARTHEW, RICHARD W. · 2006 to 2015
$2.9M
Functional interaction between the mir11~998 intronic microRNA cluster and Retinoblastoma tumor suppressor pathwayR01GM110018 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI FROLOV, MAXIM · 2015 to 2018
$1.3M
NIGMS NIH HHS R01 GM056663NIGMS NIH HHS R01 GM068743NIGMS NIH HHS R01 GM077581NIGMS NIH HHS R01 GM110018NIGMS NIH HHS R35 GM118144NIGMS NIH HHS T32 GM008061
6 · The paper itself

Abstract

The cellular abundance of mature microRNAs (miRNAs) is dictated by the efficiency of nuclear processing of primary miRNA transcripts (pri-miRNAs) into pre-miRNA intermediates. The Microprocessor complex of Drosha and DGCR8 carries this out, but it has been unclear what controls Microprocessor's differential processing of various pri-miRNAs. Here, we show that Drosophila DGCR8 (Pasha) directly associates with the C-terminal domain of the RNA polymerase II elongation complex when it is phosphorylated by the Cdk9 kinase (pTEFb). When association is blocked by loss of Cdk9 activity, a global change in pri-miRNA processing is detected. Processing of pri-miRNAs with a UGU sequence motif in their apical junction domain increases, while processing of pri-miRNAs lacking this motif decreases. Therefore, phosphorylation of RNA polymerase II recruits Microprocessor for co-transcriptional processing of non-UGU pri-miRNAs that would otherwise be poorly processed. In contrast, UGU-positive pri-miRNAs are robustly processed by Microprocessor independent of RNA polymerase association.

Indexed as

HumansMicrocomputersMicroRNAsRNA Polymerase IIMicroRNAsRNA Polymerase IIDGCR8DrosophilamicroRNARNA polymerase II

Identifiers

PMID28954229
PMCPMC5639929
OpenAlexW2759095228

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.