Evidence map›Paper›PMID 28953924›Full record

ArticlePloS one2017

The first transcriptome of Italian wall lizard, a new tool to infer about the Island Syndrome.

Martina Trapanese, Maria Buglione, Valeria Maselli, Simona Petrelli, Serena Aceto, Domenico Fulgione

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Martina TrapaneseDepartment of Biology, University of Naples Federico II, campus of Monte Sant'Angelo, Naples, Italy.
Maria BuglioneDepartment of Biology, University of Naples Federico II, campus of Monte Sant'Angelo, Naples, Italy.
Valeria MaselliDepartment of Biology, University of Naples Federico II, campus of Monte Sant'Angelo, Naples, Italy.
Simona PetrelliDepartment of Biology, University of Naples Federico II, campus of Monte Sant'Angelo, Naples, Italy.
Serena AcetoDepartment of Biology, University of Naples Federico II, campus of Monte Sant'Angelo, Naples, Italy.
Domenico FulgioneDepartment of Biology, University of Naples Federico II, campus of Monte Sant'Angelo, Naples, Italy.ORCID http://orcid.org/0000-0002-5121-3298
Federico II University Hospital · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Some insular lizards show a high degree of differentiation from their conspecific mainland populations, like Licosa island lizards, which are described as affected by Reversed Island Syndrome (RIS). In previous works, we demonstrated that some traits of RIS, as melanization, depend on a differential expression of gene encoding melanocortin receptors. To better understand the basis of syndrome, and providing raw data for future investigations, we generate the first de novo transcriptome of the Italian wall lizard. Comparing mainland and island transcriptomes, we link differences in life-traits to differential gene expression. Our results, taking together testis and brain sequences, generated 275,310 and 269,885 transcripts, 18,434 and 21,606 proteins in Gene Ontology annotation, for mainland and island respectively. Variant calling analysis identified about the same number of SNPs in island and mainland population. Instead, through a differential gene expression analysis we found some putative genes involved in syndrome more expressed in insular samples like Major Histocompatibility Complex class I, Immunoglobulins, Melanocortin 4 receptor, Neuropeptide Y and Proliferating Cell Nuclear Antigen.

Indexed as

IslandsAnimalsGene Expression ProfilingGene OntologyItalyLizardsMalePigmentationPolymorphism, Single NucleotideRNA, MessengerSequence Analysis, RNATranscriptomeRNA, Messenger

Identifiers

PMID28953924
PMCPMC5617171
OpenAlexW2759492401

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.