Evidence map›Paper›PMID 28952622›Full record

ArticleLab on a chip2017

A microfluidic trap array for longitudinal monitoring and multi-modal phenotypic analysis of individual stem cell aggregates.

E L Jackson-Holmes, T C McDevitt, H Lu

Abstract read
In one paragraph

Article in Lab on a chip, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
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  5. Article
  6. Sequential storage and release of microdroplets.Microsystems & nanoengineering · 2021
    Article
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  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

E L Jackson-HolmesSchool of Chemical & Biomolecular Engineering, Georgia Institute of Technology, Atlanta, GA, USA. hang.lu@gatech.edu.
T C McDevitt
H Lu
Georgia Institute of Technology · USGladstone Institutes · US

Funding

Quantitative microscopy-based rapid phenotyping and screeningR01GM088333 · NIGMS · GEORGIA INSTITUTE OF TECHNOLOGY · PI LU, HANG · 2011 to 2018
$2.3M
Functional characterization of an insulin-like peptide network that regulates learningR01GM108962 · NIGMS · HARVARD UNIVERSITY · PI ZHANG, YUN · 2014 to 2017
$2.2M
Quantitative Understanding of Mechnosensory Circuit on ChipR01NS096581 · NINDS · GEORGIA INSTITUTE OF TECHNOLOGY · PI LU, HANG · 2016 to 2020
$1.7M
Automated droplet-based platform for combinatorial screens on whole animalsR21EB021676 · NIBIB · GEORGIA INSTITUTE OF TECHNOLOGY · PI LU, HANG · 2015 to 2016
$429k
Microfluidic assays for hyper-reactive platelets in diabetesR21EB020424 · NIBIB · GEORGIA INSTITUTE OF TECHNOLOGY · PI LU, HANG · 2016 to 2017
$405k
Spatiotemporal control of reactive oxygen species in T cellsR56AI088023 · NIAID · GEORGIA INSTITUTE OF TECHNOLOGY · PI KEMP, MELISSA LAMBETH, LU, HANG · 2015 to 2015
$371k
MICROFLUIDIC SYSTEM FOR HIGH-THROUGHPUT EVALUATION OF T CELL FUNCTIONALITY WITH HR21CA134299 · NCI · GEORGIA INSTITUTE OF TECHNOLOGY · PI KEMP, MELISSA LAMBETH, LU, HANG · 2008 to 2009
$361k
NCI NIH HHS R21 CA134299NIAID NIH HHS R56 AI088023NIBIB NIH HHS R21 EB020424NIBIB NIH HHS R21 EB021676NIGMS NIH HHS R01 GM088333NIGMS NIH HHS R01 GM108962NINDS NIH HHS R01 NS096581
6 · The paper itself

Abstract

Three-dimensional pluripotent stem cell (PSC) cultures have the ability to undergo differentiation, self-organization, and morphogenesis to yield complex, in vitro tissue models that recapitulate key elements of native tissues. These tissue models offer a system for studying mechanisms of tissue development, investigating disease mechanisms, and performing drug screening. It remains challenging, however, to standardize PSC aggregate differentiation and morphogenesis methods due to heterogeneity stemming from biological and environmental sources. It is also difficult to monitor and assess large numbers of individual samples longitudinally throughout culture using typical batch-based culture methods. To address these challenges, we have developed a microfluidic platform for culture, longitudinal monitoring, and phenotypic analysis of individual stem cell aggregates. This platform uses a hydrodynamic loading principle to capture pre-formed stem cell aggregates in independent traps. We demonstrated that multi-day culture of aggregates in this platform reduces heterogeneity in phenotypic parameters such as size and morphology. Additionally, we showed that culture and analysis steps can be performed sequentially in the same platform, enabling correlation of multiple modes of analysis for individual samples. We anticipate this platform being applied to improve abilities for phenotypic analysis of PSC aggregate tissues and to facilitate research in standardizing culture systems in order to dually increase the yield and reduce the heterogeneity of PSC-derived tissues.

Indexed as

AnimalsCell AggregationCell SeparationEmbryonic Stem CellsEquipment DesignFluorescent Antibody TechniqueMiceMicrofluidic Analytical TechniquesMorphogenesisPhenotype

Identifiers

PMID28952622
PMCPMC5656523
OpenAlexW2756152346

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.