Evidence map›Paper›PMID 28952593›Full record

ArticleBioengineering (Basel, Switzerland)2016

Focused Screening of ECM-Selective Adhesion Peptides on Cellulose-Bound Peptide Microarrays.

Kei Kanie, Yuto Kondo, Junki Owaki, Yurika Ikeda, Yuji Narita, Ryuji Kato, Hiroyuki Honda

Abstract read
In one paragraph

Article in Bioengineering (Basel, Switzerland), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Kei KanieDepartment of Basic Medicinal Sciences, Graduate School of Pharmaceutical Sciences, Nagoya University, Aichi 464-8601, Japan. kanie-k@ps.nagoya-u.ac.jp.
Yuto KondoDepartment of Biotechnology, Graduate School of Engineering, Nagoya University, Aichi 464-8603, Japan. yuto.kondo.nagoya@gmail.com.
Junki OwakiDepartment of Biotechnology, Graduate School of Engineering, Nagoya University, Aichi 464-8603, Japan. junki.owaki.nagoya@gmail.com.
Yurika IkedaDepartment of Basic Medicinal Sciences, Graduate School of Pharmaceutical Sciences, Nagoya University, Aichi 464-8601, Japan. yurika.ikeda.nagoya@gmail.com.
Yuji NaritaDepartment of Cardiac Surgery, Nagoya University Graduate School of Medicine, Aichi 466-8550, Japan. ynarita@med.nagoya-u.ac.jp.
Ryuji KatoDepartment of Basic Medicinal Sciences, Graduate School of Pharmaceutical Sciences, Nagoya University, Aichi 464-8601, Japan. kato-r@ps.nagoya-u.ac.jp.
Hiroyuki HondaDepartment of Biotechnology, Graduate School of Engineering, Nagoya University, Aichi 464-8603, Japan. honda@nubio.nagoya-u.ac.jp.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The coating of surfaces with bio-functional proteins is a promising strategy for the creation of highly biocompatible medical implants. Bio-functional proteins from the extracellular matrix (ECM) provide effective surface functions for controlling cellular behavior. We have previously screened bio-functional tripeptides for feasibility of mass production with the aim of identifying those that are medically useful, such as cell-selective peptides. In this work, we focused on the screening of tripeptides that selectively accumulate collagen type IV (Col IV), an ECM protein that accelerates the re-endothelialization of medical implants. A SPOT peptide microarray was selected for screening owing to its unique cellulose membrane platform, which can mimic fibrous scaffolds used in regenerative medicine. However, since the library size on the SPOT microarray was limited, physicochemical clustering was used to provide broader variation than that of random peptide selection. Using the custom focused microarray of 500 selected peptides, we assayed the relative binding rates of tripeptides to Col IV, collagen type I (Col I), and albumin. We discovered a cluster of Col IV-selective adhesion peptides that exhibit bio-safety with endothelial cells. The results from this study can be used to improve the screening of regeneration-enhancing peptides.

Indexed as

amino acid indexclusteringcollagen type IVextracellular matrixpeptide microarraysphysicochemical property

Identifiers

PMID28952593
PMCPMC5597274

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.