Evidence map›Paper›PMID 28951490›Full record

ArticlePlant physiology2018

Predicting Dynamic Metabolic Demands in the Photosynthetic Eukaryote

Cristal Zuñiga, Jennifer Levering, Maciek R Antoniewicz, Michael T Guarnieri, Michael J Betenbaugh, Karsten Zengler

Open access · greenAbstract read
In one paragraph

Article in Plant physiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 61 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Cristal ZuñigaDepartment of Pediatrics, University of California, San Diego, 9500 Gilman Drive, La Jolla, California 92093-0760.ORCID 0000-0002-0135-7429
Jennifer LeveringDepartment of Pediatrics, University of California, San Diego, 9500 Gilman Drive, La Jolla, California 92093-0760.ORCID 0000-0001-8491-9337
Maciek R AntoniewiczDepartment of Chemical and Biomolecular Engineering, Metabolic Engineering and Systems Biology Laboratory, University of Delaware, 150 Academy Street, Newark, Delaware 19716.
Michael T GuarnieriNational Bioenergy Center, National Renewable Energy Laboratory, Golden, Colorado 80401.
Michael J BetenbaughDepartment of Chemical and Biomolecular Engineering, Johns Hopkins University, Baltimore, Maryland 21218.ORCID 0000-0002-6336-4659
Karsten ZenglerDepartment of Pediatrics, University of California, San Diego, 9500 Gilman Drive, La Jolla, California 92093-0760 kzengler@ucsd.edu.ORCID 0000-0002-8062-3296
University of California San Diego · USJohns Hopkins University · USNational Laboratory of the Rockies · USUniversity of Delaware · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phototrophic organisms exhibit a highly dynamic proteome, adapting their biomass composition in response to diurnal light/dark cycles and nutrient availability. Here, we used experimentally determined biomass compositions over the course of growth to determine and constrain the biomass objective function (BOF) in a genome-scale metabolic model of

Indexed as

PhotosynthesisBiomassChlorella vulgarisGene Expression ProfilingMembrane Transport ProteinsNitrogenPhototrophic ProcessesProteomeMembrane Transport ProteinsNitrogenProteome

Identifiers

PMID28951490
PMCPMC5761767
OpenAlexW2758087862

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.