Evidence map›Paper›PMID 28950892›Full record

ArticlePediatric rheumatology online journal2017

Next Generation Sequencing identifies mutations in GNPTG gene as a cause of familial form of scleroderma-like disease.

Abdelali Zrhidri, Saadia Amasdl, Jaber Lyahyai, Hanane Elouardi, Bouchra Chkirate, Laure Raymond, Grégory Egéa, Mohamed Taoudi, Said El Mouatassim, Abdelaziz Sefiani

Open access · goldAbstract readCase Reports
In one paragraph

Article in Pediatric rheumatology online journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Abdelali ZrhidriCentre de Génomique Humaine, Faculté de Médecine et de Pharmacie, Mohammed V University, Rabat, Morocco.
Saadia AmasdlCentre de Génomique Humaine, Faculté de Médecine et de Pharmacie, Mohammed V University, Rabat, Morocco.
Jaber LyahyaiCentre de Génomique Humaine, Faculté de Médecine et de Pharmacie, Mohammed V University, Rabat, Morocco. jaber.lyahyai@gmail.com.
Hanane ElouardiDépartement de pédiatrie médicale, Hôpital d'Enfant, Rabat, Morocco.
Bouchra ChkirateDépartement de pédiatrie médicale, Hôpital d'Enfant, Rabat, Morocco.
Laure RaymondDépartement de Génétique Moléculaire, Laboratoire Biomnis, Lyon, France.
Grégory EgéaDépartement de Génétique Moléculaire, Laboratoire Biomnis, Lyon, France.
Mohamed TaoudiDépartement de Génétique Moléculaire, Laboratoire Biomnis, Lyon, France.
Said El MouatassimDépartement de Génétique Moléculaire, Laboratoire Biomnis, Lyon, France.
Abdelaziz SefianiCentre de Génomique Humaine, Faculté de Médecine et de Pharmacie, Mohammed V University, Rabat, Morocco.
Mohammed V University · MAInstitut National d'Hygiène du Maroc · MA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundScleroderma is a multisystem disease, characterized by fibrosis of skin and internal organs, immune dysregulation, and vasculopathy. The etiology of the disease remains unknown, but it is likely multifactorial. However, the genetic basis for this condition is defined by multiple genes that have only modest effect on disease susceptibility.

methodsThree Moroccan siblings, born from non-consanguineous Moroccan healthy parents were referred for genetic evaluation of familial scleroderma. Whole Exome Sequencing was performed in the proband and his parents, in addition to Sanger sequencing that was carried out to confirm the results obtained.

resultsMutation analysis showed two compound heterozygous mutations c.196C>T in exon 4 and c.635_636delTT in exon 9 of GNPTG gene. Sanger sequencing confirmed these mutations in the affected patient and demonstrated that their parents are heterozygous carriers.

conclusionOur findings expand the mutation spectrum of the GNPTG gene and extend the knowledge of the phenotype-genotype correlation of Mucolipidosis Type III gamma. This report also highlights the diagnostic utility of Next Generation Sequencing particularly when the clinical presentation did not point to specific genes.

Indexed as

AdolescentDiagnosis, DifferentialDNA Mutational AnalysisExome SequencingHeterozygoteHigh-Throughput Nucleotide SequencingHumansMaleMoroccoMucolipidosesMutationPedigreeScleroderma, SystemicSiblingsTransferases (Other Substituted Phosphate Groups)GNPTG protein, humanTransferases (Other Substituted Phosphate Groups)GNPTGMucolipidosis III gammaWhole exome sequencing

Identifiers

PMID28950892
PMCPMC5615433
OpenAlexW2759287363

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.