Evidence map›Paper›PMID 28949295›Full record

ArticleeLife2017

Msn2/4 regulate expression of glycolytic enzymes and control transition from quiescence to growth.

Zheng Kuang, Sudarshan Pinglay, Hongkai Ji, Jef D Boeke

Open access · goldAbstract read
In one paragraph

Article in eLife, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed, 1 pooled it
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 1 synthesis or guideline pooled it, 72 citations in OpenAlex.

  1. Pooled it
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  16. Genetic inactivation of essentialMolecular biology of the cell · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Zheng KuangInstitute for Systems Genetics, NYU Langone Medical Center, New York, United States.ORCID 0000-0001-5855-8371
Sudarshan PinglayInstitute for Systems Genetics, NYU Langone Medical Center, New York, United States.ORCID 0000-0002-8781-1476
Hongkai JiDepartment of Biostatistics, Johns Hopkins University School of Public Health, Baltimore, United States.
Jef D BoekeInstitute for Systems Genetics, NYU Langone Medical Center, New York, United States.ORCID 0000-0001-5322-4946
Johns Hopkins University · USNYU Langone Health · US

Funding

Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ANIRBAN MAITRA · 1985 to 2026
$83.1M
Networks, Pathways and Dynamics of Lysine ModificationU54GM103520 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI BADER, JOEL S. · 2012 to 2013
$7.0M
Computational Tools for Mining Large Amounts of ChIP and Gene Expression DataR01HG006282 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI JI, HONGKAI · 2012 to 2016
$2.0M
Statistical and Computational Tools for Next-generation ChIP-seq ApplicationsR01HG006841 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI JI, HONGKAI · 2012 to 2014
$951k
NCI NIH HHS P30 CA016087NHGRI NIH HHS R01 HG006282NHGRI NIH HHS R01 HG006841NIGMS NIH HHS U54 GM103520
6 · The paper itself

Abstract

Nutrient availability and stresses impact a cell's decision to enter a growth state or a quiescent state. Acetyl-CoA stimulates cell growth under nutrient-limiting conditions, but how cells generate acetyl-CoA under starvation stress is less understood. Here, we show that general stress response factors, Msn2 and Msn4, function as master transcriptional regulators of yeast glycolysis via directly binding and activating genes encoding glycolytic enzymes. Yeast cells lacking Msn2 and Msn4 exhibit prevalent repression of glycolytic genes and a significant delay of acetyl-CoA accumulation and reentry into growth from quiescence. Thus Msn2/4 exhibit a dual role in activating carbohydrate metabolism genes and stress response genes. These results suggest a possible mechanism by which starvation-induced stress response factors may prime quiescent cells to reenter growth through glycolysis when nutrients are limited.

Indexed as

Gene Expression Regulation, FungalGlycolysisAcetyl Coenzyme ADNA-Binding ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsStress, PhysiologicalTranscription FactorsTranscription, GeneticAcetyl Coenzyme ADNA-Binding ProteinsMSN2 protein, S cerevisiaeMSN4 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsTranscription Factorsacetyl-CoAchromosomesgenesglycolysisMsn2Msn4quiescence to growthS. cerevisiaestress response transcription factor

Identifiers

PMID28949295
PMCPMC5634782
OpenAlexW2757241038

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.