Evidence map›Paper›PMID 28948393›Full record

ReviewPlanta2017

Within and beyond the stringent response-RSH and (p)ppGpp in plants.

Justyna Boniecka, Justyna Prusińska, Grażyna B Dąbrowska, Anna Goc

Open access · hybridAbstract readReview
In one paragraph

Review in Planta, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. International journal of molecular sciences · 2023
    Article
  7. Article
  8. Bacterial Pathogen Infection Triggers Magic Spot Nucleotide Signaling inJournal of the American Chemical Society · 2023
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. RNA Editing in Chloroplast: Advancements and Opportunities.Current issues in molecular biology · 2022
    Review
  15. Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Justyna BonieckaDepartment of Genetics, Nicolaus Copernicus University in Toruń, Lwowska 1, 87-100, Toruń, Poland.
Justyna PrusińskaSchool of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK.
Grażyna B DąbrowskaDepartment of Genetics, Nicolaus Copernicus University in Toruń, Lwowska 1, 87-100, Toruń, Poland. browsk@umk.pl.
Anna GocDepartment of Genetics, Nicolaus Copernicus University in Toruń, Lwowska 1, 87-100, Toruń, Poland.
Nicolaus Copernicus University · PLUniversity of Warwick · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MAIN

conclusionPlant RSH proteins are able to synthetize and/or hydrolyze unusual nucleotides called (p)ppGpp or alarmones. These molecules regulate nuclear and chloroplast transcription, chloroplast translation and plant development and stress response. Homologs of bacterial RelA/SpoT proteins, designated RSH, and products of their activity, (p)ppGpp-guanosine tetra-and pentaphosphates, have been found in algae and higher plants. (p)ppGpp were first identified in bacteria as the effectors of the stringent response, a mechanism that orchestrates pleiotropic adaptations to nutritional deprivation and various stress conditions. (p)ppGpp accumulation in bacteria decreases transcription-with exception to genes that help to withstand or overcome current stressful situations, which are upregulated-and translation as well as DNA replication and eventually reduces metabolism and growth but promotes adaptive responses. In plants, RSH are nuclei-encoded and function in chloroplasts, where alarmones are produced and decrease transcription, translation, hormone, lipid and metabolites accumulation and affect photosynthetic efficiency and eventually plant growth and development. During senescence, alarmones coordinate nutrient remobilization and relocation from vegetative tissues into seeds. Despite the high conservancy of RSH protein domains among bacteria and plants as well as the bacterial origin of plant chloroplasts, in plants, unlike in bacteria, (p)ppGpp promote chloroplast DNA replication and division. Next, (p)ppGpp may also perform their functions in cytoplasm, where they would promote plant growth inhibition. Furthermore, (p)ppGpp accumulation also affects nuclear gene expression, i.a., decreases the level of Arabidopsis defense gene transcripts, and promotes plants susceptibility towards Turnip mosaic virus. In this review, we summarize recent findings that show the importance of RSH and (p)ppGpp in plant growth and development, and open an area of research aiming to understand the function of plant RSH in response to stress.

Indexed as

Plant DevelopmentAdaptation, PhysiologicalArabidopsisChloroplastsGuanosine PentaphosphateLigasesPlant ProteinsPlantsStress, Physiologicalguanosine 3',5'-polyphosphate synthetasesGuanosine PentaphosphateLigasesPlant ProteinsAlarmonesPhotosynthesisPlant growth and developmentRelA/SpoT homologsSenescenceStress response

Identifiers

PMID28948393
PMCPMC5633626
OpenAlexW2760120034

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.