Evidence map›Paper›PMID 28947718›Full record

ArticleJournal of genetics2017

The association study of nonsyndromic cleft lip with or without cleft palate identified risk variants of the GLI3 gene in a Chinese population.

Yirui Wang, Yimin Sun, Yongqing Huang, Yongchu Pan, Bing Shi, Jian Ma, Lan Ma, Feifei Lan, Yuxi Zhou, Jiayu Shi and 10 more

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In one paragraph

Article in Journal of genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Frontiers in genetics · 2021
    Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 8 institutions in 2 countries.

Yirui WangDepartment of Biomedical Engineering, Medical Systems Biology Research Center, Tsinghua University School of Medicine, Beijing 100084, People's Republic of China. jcheng@tsinghua.edu.cn.
Yimin Sun
Yongqing Huang
Yongchu Pan
Bing Shi
Jian Ma
Lan Ma
Feifei Lan
Yuxi Zhou
Jiayu Shi
Jinfang Zhu
Hongbing Jiang
Lei Zhang
Xue Xiao
Min Jiang
Aihua Yin
Lili Yu
Lin Wang
Jing Cheng
Yinxue Yang
Beijing VDJBio (China) · CNNorth Minzu University · CNNanjing Medical University · CNGuangdong Province Women and Children Hospital · CNNingxia Medical University · CNSichuan University · CNUniversity of California, Los Angeles · USUniversity Town of Shenzhen · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nonsyndromic cleft lip with or without cleft palate (NSCL/P) is a common birth defect due to abnormal orofacial development. Previous studies report abnormal sonic hedgehog (SHH) signalling activity during NSCL/P pathogenesis and propose several genes in the SHH pathway as candidate risk genes. As such, we focussed on GLI3, a downstream modulator of the SHH pathway. In the present study,we genotyped 34 tag SNPs covering GLI3 and performed association analysis with NSCL/P in 504 cases and 455 healthy controls. Our preliminary results identified risk variants of GLI3 that are associated with NSCL/P susceptibility in a Chinese population. In particular, rs3801161 and its haplotypes rs3801161-rs7785287 displayed significant association with NSCL/P and survived Bonferroni correction for multiple comparisons. The robustness of the association between GLI3 and NSCL/P is worth further examination in the future across different populations.

Indexed as

Genetic Association StudiesGenetic Predisposition to DiseaseGenetic VariationAllelesCase-Control StudiesCleft LipCleft PalateFemaleHaplotypesHumansLinkage DisequilibriumMaleNerve Tissue ProteinsOdds RatioPolymorphism, Single NucleotideZinc Finger Protein Gli3GLI3 protein, humanNerve Tissue ProteinsZinc Finger Protein Gli3

Identifiers

PMID28947718
OpenAlexW2753359739

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.