Evidence map›Paper›PMID 28947618›Full record

ArticleThe EMBO journal2018

Sde2 is an intron-specific pre-mRNA splicing regulator activated by ubiquitin-like processing.

Poonam Thakran, Prashant Arun Pandit, Sumanjit Datta, Kiran Kumar Kolathur, Jeffrey A Pleiss, Shravan Kumar Mishra

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 41 citations in OpenAlex.

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  5. Light controls gene functions through alternative splicing in fungi.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  10. Dysfunction of Gpl1-Gih35-Wdr83 Complex inInternational journal of molecular sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Poonam ThakranMax Planck - DST Partner Group, Department of Biological Sciences, Centre for Protein Science Design and Engineering, Indian Institute of Science Education and Research (IISER) Mohali, Mohali, Punjab, India.ORCID 0000-0001-7348-9677
Prashant Arun PanditMax Planck - DST Partner Group, Department of Biological Sciences, Centre for Protein Science Design and Engineering, Indian Institute of Science Education and Research (IISER) Mohali, Mohali, Punjab, India.
Sumanjit DattaMax Planck - DST Partner Group, Department of Biological Sciences, Centre for Protein Science Design and Engineering, Indian Institute of Science Education and Research (IISER) Mohali, Mohali, Punjab, India.ORCID 0000-0001-9476-7162
Kiran Kumar KolathurMax Planck - DST Partner Group, Department of Biological Sciences, Centre for Protein Science Design and Engineering, Indian Institute of Science Education and Research (IISER) Mohali, Mohali, Punjab, India.
Jeffrey A PleissDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY, USA.
Shravan Kumar MishraMax Planck - DST Partner Group, Department of Biological Sciences, Centre for Protein Science Design and Engineering, Indian Institute of Science Education and Research (IISER) Mohali, Mohali, Punjab, India skmishra@iisermohali.ac.in mishra.iiserm@gmail.com.ORCID 0000-0003-3899-0495
Indian Institute of Science Education and Research Mohali · INCornell University · US

Funding

Mechanisms of environmentally responsive splicing in S.PombeR01GM098634 · NIGMS · CORNELL UNIVERSITY · PI PLEISS, JEFFREY A · 2011 to 2020
$2.9M
NIGMS NIH HHS R01 GM098634
6 · The paper itself

Abstract

The expression of intron-containing genes in eukaryotes requires generation of protein-coding messenger RNAs (mRNAs) via RNA splicing, whereby the spliceosome removes non-coding introns from pre-mRNAs and joins exons. Spliceosomes must ensure accurate removal of highly diverse introns. We show that Sde2 is a ubiquitin-fold-containing splicing regulator that supports splicing of selected pre-mRNAs in an intron-specific manner in

Indexed as

IntronsRNA SplicingDNA-Binding ProteinsGenomic InstabilityHumansRNA, FungalRNA, MessengerRNA PrecursorsSchizosaccharomycesSchizosaccharomyces pombe ProteinsSpliceosomesUbiquitinDNA-Binding ProteinsRNA, FungalRNA, MessengerRNA PrecursorsSchizosaccharomyces pombe ProteinsSDE2 protein, humanUbiquitindeubiquitinating enzymesintron‐specific pre‐mRNA splicingN‐end rule pathwaytelomeric silencingubiquitin‐like processing

Identifiers

PMID28947618
PMCPMC5753039
OpenAlexW2760811494

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.