Evidence map›Paper›PMID 28947543›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2017

H3K27 Methylation Dynamics during CD4 T Cell Activation: Regulation of JAK/STAT and IL12RB2 Expression by JMJD3.

Sarah A LaMere, Ryan C Thompson, Xiangzhi Meng, H Kiyomi Komori, Adam Mark, Daniel R Salomon

Open access · greenAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 41 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. JMJD3 PromotesDNA and cell biology · 2022
    Article
  7. Article
  8. Review
  9. T Cell Metabolism in Infection.Frontiers in immunology · 2022
    Review
  10. Review
  11. Article
  12. Article
  13. Running to Stand Still: Naive CD8International journal of molecular sciences · 2020
    Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Review
  20. The full spectrum of human naive T cells.Nature reviews. Immunology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Sarah A LaMereDepartment of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA 92037 salamere@ucsd.edu.ORCID 0000-0002-4612-0425
Ryan C ThompsonDepartment of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA 92037.ORCID 0000-0002-0450-8181
Xiangzhi MengDepartment of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA 92037.ORCID 0000-0002-4743-9972
H Kiyomi KomoriDepartment of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA 92037.
Adam MarkDepartment of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA 92037.
Daniel R SalomonDepartment of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA 92037.
Scripps Research Institute · US

Funding

Quantitative Biology CoreU19AI063603 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI YATES III, JOHN R · 2004 to 2015
$26.4M
SUPPLEMENT TO INVESTIGATIVE HEMATOLOGYT32DK007022 · NIDDK · SCRIPPS RESEARCH INSTITUTE, THE · PI SOLOMON, DANIEL RENEE · 1986 to 2009
$2.3M
UCSD Research Training Program for VeterinariansT32OD017863 · OD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ERNST, PETER B., SIGURDSON, CHRISTINA · 2014 to 2023
$2.0M
Scripps Translational Science InstituteTL1TR001113 · NCATS · SCRIPPS RESEARCH INSTITUTE, THE · PI TOPOL, ERIC JEFFREY · 2013 to 2017
$1.0M
NCATS NIH HHS TL1 TR001113NIAID NIH HHS U19 AI063603NIDDK NIH HHS T32 DK007022NIH HHS T32 OD017863
6 · The paper itself

Abstract

The changes to the epigenetic landscape in response to Ag during CD4 T cell activation have not been well characterized. Although CD4 T cell subsets have been mapped globally for numerous epigenetic marks, little has been done to study their dynamics early after activation. We have studied changes to promoter H3K27me3 during activation of human naive and memory CD4 T cells. Our results show that these changes occur relatively early (1 d) after activation of naive and memory cells and that demethylation is the predominant change to H3K27me3 at this time point, reinforcing high expression of target genes. Additionally, inhibition of the H3K27 demethylase JMJD3 in naive CD4 T cells demonstrates how critically important molecules required for T cell differentiation, such as JAK2 and IL12RB2, are regulated by H3K27me3. Our results show that H3K27me3 is a dynamic and important epigenetic modification during CD4 T cell activation and that JMJD3-driven H3K27 demethylation is critical for CD4 T cell function.

Indexed as

Lymphocyte ActivationCD4-Positive T-LymphocytesEpigenesis, GeneticGene Expression Regulation, EnzymologicHistonesHumansJanus Kinase 2Jumonji Domain-Containing Histone DemethylasesMethylationProtein Processing, Post-TranslationalReceptors, Interleukin-12STAT Transcription FactorsHistonesIL12RB2 protein, humanJAK2 protein, humanJanus Kinase 2Jumonji Domain-Containing Histone DemethylasesKDM6B protein, humanReceptors, Interleukin-12STAT Transcription Factors

Identifiers

PMID28947543
PMCPMC5679303
OpenAlexW2757178635

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.