Evidence map›Paper›PMID 28946642›Full record

ArticleInternational journal of molecular sciences2017

E-Learning for Rare Diseases: An Example Using Fabry Disease.

Chiara Cimmaruta, Ludovica Liguori, Maria Monticelli, Giuseppina Andreotti, Valentina Citro

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
0.3field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 7 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Chiara CimmarutaDipartimento di Biologia, Università Federico II, 80126 Napoli, Italy. chiara.cimmaruta@unina.it.
Ludovica LiguoriIstituto di Chimica Biomolecolare, Consiglio Nazionale delle Ricerche, Comprensorio Olivetti, Edificio 70, Via Campi Flegrei 34, 80078 Pozzuoli, Italy. lud.liguori@gmail.com.
Maria MonticelliDipartimento di Biologia, Università Federico II, 80126 Napoli, Italy. 2.maria.monticelli@gmail.com.ORCID 0000-0003-3136-2138
Giuseppina AndreottiIstituto di Chimica Biomolecolare, Consiglio Nazionale delle Ricerche, Comprensorio Olivetti, Edificio 70, Via Campi Flegrei 34, 80078 Pozzuoli, Italy. gandreotti@icb.cnr.it.ORCID 0000-0002-1594-0156
Valentina CitroDipartimento di Biologia, Università Federico II, 80126 Napoli, Italy. vale.ctr@gmail.com.
University of Naples Federico II · ITIstituto di Chimica Biomolecolare · ITUniversity of Campania "Luigi Vanvitelli" · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRare diseases represent a challenge for physicians because patients are rarely seen, and they can manifest with symptoms similar to those of common diseases. In this work, genetic confirmation of diagnosis is derived from DNA sequencing. We present a tutorial for the molecular analysis of a rare disease using Fabry disease as an example.

methodsAn exonic sequence derived from a hypothetical male patient was matched against human reference data using a genome browser. The missense mutation was identified by running BlastX, and information on the affected protein was retrieved from the database UniProt. The pathogenic nature of the mutation was assessed with PolyPhen-2. Disease-specific databases were used to assess whether the missense mutation led to a severe phenotype, and whether pharmacological therapy was an option.

resultsAn inexpensive bioinformatics approach is presented to get the reader acquainted with the diagnosis of Fabry disease. The reader is introduced to the field of pharmacological chaperones, a therapeutic approach that can be applied only to certain Fabry genotypes.

conclusionThe principle underlying the analysis of exome sequencing can be explained in simple terms using web applications and databases which facilitate diagnosis and therapeutic choices.

Indexed as

Computational BiologyRare DiseasesAdolescentalpha-GalactosidaseDatabases, GeneticFabry DiseaseGenes, X-LinkedGenomicsHumansMaleMutationUser-Computer Interfacealpha-Galactosidasebioinformatics educationbioinformatics toolslaboratory guidepharmacological chaperonerare disease

Identifiers

PMID28946642
PMCPMC5666731
OpenAlexW2757099347

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.