Evidence map›Paper›PMID 28945795›Full record

ArticlePloS one2017

Cellular heterogeneity contributes to subtype-specific expression of ZEB1 in human glioblastoma.

Philipp Euskirchen, Josefine Radke, Marc Sören Schmidt, Eva Schulze Heuling, Eric Kadikowski, Meron Maricos, Felix Knab, Ulrike Grittner, Norman Zerbe, Marcus Czabanka and 6 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Analysis of the PJournal of molecular neuroscience : MN · 2021
    Article
  6. Article
  7. The Curious Case of ZEB1.Discoveries (Craiova, Romania) · 2018
    Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 2 countries.

Philipp EuskirchenDept. of Neurology, Charité -Universitätsmedizin Berlin, Berlin, Germany.ORCID http://orcid.org/0000-0002-9138-805X
Josefine RadkeBerlin Institute of Health (BIH), Berlin, Germany.
Marc Sören SchmidtDept. of Experimental Neurology, Charité -Universitätsmedizin Berlin, Berlin, Germany.
Eva Schulze HeulingDept. of Experimental Neurology, Charité -Universitätsmedizin Berlin, Berlin, Germany.
Eric KadikowskiDept. of Experimental Neurology, Charité -Universitätsmedizin Berlin, Berlin, Germany.
Meron MaricosDept. of Experimental Neurology, Charité -Universitätsmedizin Berlin, Berlin, Germany.
Felix KnabDept. of Experimental Neurology, Charité -Universitätsmedizin Berlin, Berlin, Germany.
Ulrike GrittnerCenter for Stroke Research Berlin, Charité -Universitätsmedizin Berlin, Berlin, Germany.
Norman ZerbeDept. of Pathology, Charité -Universitätsmedizin Berlin, Berlin, Germany.
Marcus CzabankaDept. of Neurosurgery, Charité -Universitätsmedizin Berlin, Berlin, Germany.
Christoph DieterichComputational RNA Biology and Ageing Group, Max-Planck-Institute for the Biology of Ageing, Cologne, Germany.
Hrvoje MileticDept. of Biomedicine, University of Bergen, Bergen, Norway.
Sverre MørkDepartment of Pathology, Haukeland University Hospital, Bergen, Norway.
Arend KochBerlin Institute of Health (BIH), Berlin, Germany.
Matthias EndresDept. of Neurology, Charité -Universitätsmedizin Berlin, Berlin, Germany.
Christoph HarmsDept. of Experimental Neurology, Charité -Universitätsmedizin Berlin, Berlin, Germany.
Charité - Universitätsmedizin Berlin · DEBerlin Institute of Health at Charité - Universitätsmedizin Berlin · DEGerman Cancer Society · DEHaukeland University Hospital · NOGerman Center for Neurodegenerative Diseases · DEMax Planck Institute for Biology of Ageing · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The transcription factor ZEB1 has gained attention in tumor biology of epithelial cancers because of its function in epithelial-mesenchymal transition, DNA repair, stem cell biology and tumor-induced immunosuppression, but its role in gliomas with respect to invasion and prognostic value is controversial. We characterized ZEB1 expression at single cell level in 266 primary brain tumors and present a comprehensive dataset of high grade gliomas with Ki67, p53, IDH1, and EGFR immunohistochemistry, as well as EGFR FISH. ZEB1 protein expression in glioma stem cell lines was compared to their parental tumors with respect to gene expression subtypes based on RNA-seq transcriptomic profiles. ZEB1 is widely expressed in glial tumors, but in a highly variable fraction of cells. In glioblastoma, ZEB1 labeling index is higher in tumors with EGFR amplification or IDH1 mutation. Co-labeling studies showed that tumor cells and reactive astroglia, but not immune cells contribute to the ZEB1 positive population. In contrast, glioma cell lines constitutively express ZEB1 irrespective of gene expression subtype. In conclusion, our data indicate that immune infiltration likely contributes to differential labelling of ZEB1 and confounds interpretation of bulk ZEB1 expression data.

Indexed as

Brain NeoplasmsCell Line, TumorErbB ReceptorsGlioblastomaGliomaHumansImmunohistochemistryIn Situ Hybridization, FluorescenceIsocitrate DehydrogenaseMutationRNA, MessengerRNA, NeoplasmTranscriptomeTumor MicroenvironmentZinc Finger E-box-Binding Homeobox 1EGFR protein, humanErbB ReceptorsIDH1 protein, humanIsocitrate DehydrogenaseRNA, MessengerRNA, NeoplasmZEB1 protein, humanZinc Finger E-box-Binding Homeobox 1

Identifiers

PMID28945795
PMCPMC5612763
OpenAlexW2756705171

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.