Evidence map›Paper›PMID 28944885›Full record

ArticleMolecular medicine reports2017

Exploring the key genes and pathways of osteosarcoma with pulmonary metastasis using a gene expression microarray.

Zhongju Shi, Hengxing Zhou, Bin Pan, Lu Lu, Zhijian Wei, Linlin Shi, Xue Yao, Yi Kang, Shiqing Feng

Open access · bronzeAbstract read
In one paragraph

Article in Molecular medicine reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 36 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Zhongju ShiDepartment of Orthopedics, Tianjin Medical University General Hospital, Tianjin 300052, P.R. China.
Hengxing ZhouDepartment of Orthopedics, Tianjin Medical University General Hospital, Tianjin 300052, P.R. China.
Bin PanDepartment of Orthopaedics, The Affiliated Hospital of Xuzhou Medical University, Xuzhou, Jiangsu 221006, P.R. China.
Lu LuDepartment of Orthopedics, Tianjin Medical University General Hospital, Tianjin 300052, P.R. China.
Zhijian WeiDepartment of Orthopedics, Tianjin Medical University General Hospital, Tianjin 300052, P.R. China.
Linlin ShiDepartment of Orthopedics, Tianjin Medical University General Hospital, Tianjin 300052, P.R. China.
Xue YaoDepartment of Orthopedics, Tianjin Medical University General Hospital, Tianjin 300052, P.R. China.
Yi KangDepartment of Orthopedics, Tianjin Medical University General Hospital, Tianjin 300052, P.R. China.
Shiqing FengDepartment of Orthopedics, Tianjin Medical University General Hospital, Tianjin 300052, P.R. China.
Tianjin Medical University General Hospital · CNXuzhou Medical College · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Osteosarcoma is a common and highly malignant tumour in children and teenagers that is characterized by drug resistance and high metastatic potential. Patients often develop pulmonary metastasis and have a low survival rate. However, the mechanistic basis for pulmonary metastasis remains unclear. To identify key gene and pathways associated with pulmonary metastasis of osteosarcoma, the authors downloaded the gene expression dataset GSE85537 and obtained the differentially expressed genes (DEGs) by analyzing high‑throughput gene expression in primary tumours and lung metastases. Subsequently, the authors performed gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes pathway (KEGG) enrichment analyses and a protein‑protein interaction (PPI) network was constructed and analyzed by Cytoscape software. In total, 2,493 genes were identified as DEGs. Of these, 485 genes (19.45%) were upregulated, and the remaining 2,008 genes (80.55%) were downregulated. The authors identified the predominant GO categories and KEGG pathways that were significantly over‑represented in the metastatic OS samples compared with the non‑metastatic OS samples. A PPI network was constructed, and the results indicated that ALB, EGFR, INS, IL6, CDH1, FYN, ERBB2, IL8, CXCL12 and RAC2 were the top 10 core genes. The enrichment analyses of the genes involved in the top three significant modules demonstrated that the DEGs were principally related to neuroactive ligand‑receptor interaction, the Rap1 signaling pathway, and protein digestion and absorption. Together, these data elucidated the molecular mechanisms of OS patients with pulmonary metastasis and provide potential therapeutic targets. However, further experimental studies are needed to confirm these results.

Indexed as

Bone NeoplasmsDatabases, GeneticErbB ReceptorsGene Expression ProfilingGene Expression Regulation, NeoplasticHumansInterleukin-6Lung NeoplasmsOligonucleotide Array Sequence AnalysisOsteosarcomaProtein Interaction Mapsrap1 GTP-Binding ProteinsSerum Albumin, HumanSignal TransductionSoftwareALB protein, humanEGFR protein, humanErbB ReceptorsInterleukin-6rap1 GTP-Binding ProteinsSerum Albumin, Human

Identifiers

PMID28944885
PMCPMC5865874
OpenAlexW2756839346

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.