Evidence map›Paper›PMID 28944855›Full record

ArticleMolecular medicine reports2017

Integrated mRNAseq and microRNAseq data analysis for grade III gliomas.

Junqiang Dai, Zhitong Bing, Yinian Zhang, Qiao Li, Liang Niu, Wentao Liang, Guoqiang Yuan, Lei Duan, Hang Yin, Yawen Pan

Abstract read
In one paragraph

Article in Molecular medicine reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. High Expression of KIFC1 in Glioma Correlates with Poor Prognosis.Journal of Korean Neurosurgical Society · 2024
    Article
  3. Article
  4. AnPeerJ · 2023
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Investigation of miRNA and mRNA Co-expression Network in Ependymoma.Frontiers in bioengineering and biotechnology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Junqiang DaiDepartment of Neurosurgery, Lanzhou University Second Hospital, Lanzhou, Gansu 730030, P.R. China.
Zhitong BingInstitute of Modern Physics, Chinese Academy of Sciences, Lanzhou, Gansu 730000, P.R. China.
Yinian ZhangDepartment of Neurosurgery, Lanzhou University Second Hospital, Lanzhou, Gansu 730030, P.R. China.
Qiao LiDepartment of Neurosurgery, Lanzhou University Second Hospital, Lanzhou, Gansu 730030, P.R. China.
Liang NiuDepartment of Neurosurgery, Lanzhou University Second Hospital, Lanzhou, Gansu 730030, P.R. China.
Wentao LiangDepartment of Neurosurgery, Lanzhou University Second Hospital, Lanzhou, Gansu 730030, P.R. China.
Guoqiang YuanInstitute of Neurology, Lanzhou University Second Hospital, Lanzhou, Gansu 730030, P.R. China.
Lei DuanDepartment of Neurosurgery, Lanzhou University Second Hospital, Lanzhou, Gansu 730030, P.R. China.
Hang YinDepartment of Neurosurgery, Lanzhou University Second Hospital, Lanzhou, Gansu 730030, P.R. China.
Yawen PanDepartment of Neurosurgery, Lanzhou University Second Hospital, Lanzhou, Gansu 730030, P.R. China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The World Health Organization classification distinguishes four grades for gliomas. Grade III gliomas, which are brain malignant brain tumors with variable biological behavior and propensity, have been not widely investigated. The objective of the present study was to identify specific gene modules and valuable hubs associated with gliomagenesis and molecular signatures to assist in determining grade III glioma prognosis. mRNAseq and micro (mi)RNAseq data were used to construct a co‑expression network of gliomas using weight gene co‑expression network analysis, and revealed the prognostic molecular signature of grade III gliomas. The differently expressed miRNAs and mRNAs were identified. A total of 37 mRNAs and 10 miRNAs were identified, which were closely associated with the survival rates of patients with grade III glioma. To further understand the tumorigenesis, Cytoscape software was used to construct a network containing these differently expressed molecules. The result suggested that both the downregulated genes and upregulated genes are vital in the process of glioma deterioration, and certain genes are closely associated with clinical prognosis.

Indexed as

AdultAgedBiomarkers, TumorBrain NeoplasmsCluster AnalysisFemaleGene Expression Regulation, NeoplasticGene Regulatory NetworksGliomaHumansMaleMicroRNAsMiddle AgedNeoplasm GradingPrognosisRNA, MessengerBiomarkers, TumorMicroRNAsRNA, Messenger

Identifiers

PMID28944855
PMCPMC5865882

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.