Evidence map›Paper›PMID 28939774›Full record

ArticleThe Journal of biological chemistry2017

Bacterial DnaB helicase interacts with the excluded strand to regulate unwinding.

Sean M Carney, Shivasankari Gomathinayagam, Sanford H Leuba, Michael A Trakselis

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Mechanisms of hexameric helicases.Critical reviews in biochemistry and molecular biology · 2021
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Sean M CarneyFrom the Molecular Biophysics and Structural Biology Program, University of Pittsburgh, Pittsburgh, Pennsylvania 15260.
Shivasankari GomathinayagamDepartment of Chemistry and Biochemistry, Baylor University, Waco, Texas 76798, and.
Sanford H LeubaFrom the Molecular Biophysics and Structural Biology Program, University of Pittsburgh, Pittsburgh, Pennsylvania 15260.ORCID 0000-0003-0278-7997
Michael A TrakselisFrom the Molecular Biophysics and Structural Biology Program, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, michael_trakselis@baylor.edu.ORCID 0000-0001-7054-8475
Baylor University · USUniversity of Pittsburgh · US

Funding

NNRTI induced conformational changes in HIV-1 RT - Equipment SupplementR01GM068406 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SLUIS-CREMER, NICOLAS PAUL · 2003 to 2017
$3.7M
Novel mechanisms of HIV resistance to RTIsR01AI081571 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SLUIS-CREMER, NICOLAS PAUL · 2009 to 2018
$3.0M
NIAID NIH HHS R01 AI081571NIGMS NIH HHS R01 GM068406
6 · The paper itself

Abstract

Replicative hexameric helicases are thought to unwind duplex DNA by steric exclusion (SE) where one DNA strand is encircled by the hexamer and the other is excluded from the central channel. However, interactions with the excluded strand on the exterior surface of hexameric helicases have also been shown to be important for DNA unwinding, giving rise to the steric exclusion and wrapping (SEW) model. For example, the archaeal

Indexed as

Amino Acid SequenceDNA, BacterialDnaB HelicasesEscherichia coliFluorescence Resonance Energy TransferModels, MolecularNucleic Acid ConformationProtein BindingSequence AlignmentStatic ElectricityDNA, BacterialDnaB HelicasesdnaB protein, E coliDnaBDNA helicaseDNA-protein interactionDNA replicationnucleic acid enzymologysingle-molecule biophysicssteric exclusion and wrappingunwinding

Identifiers

PMID28939774
PMCPMC5704481
OpenAlexW2757357164

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.