Evidence map›Paper›PMID 28935894›Full record

ArticleScientific reports2017

Strain-dependent neutralization reveals antigenic variation of human parechovirus 3.

Eveliina Karelehto, Sabine van der Sanden, James A Geraets, Aušra Domanska, Lonneke van der Linden, Dionne Hoogendoorn, Gerrit Koen, Hetty van Eijk, Shabih Shakeel, Tim Beaumont and 4 more

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Examining Clinical Features and Severe Neurologic Disease of Parechovirus Infection in Young Infants: A Multistate Cohort Study.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Enterovirus D68 serosurvey: evidence for endemic circulation in the Netherlands, 2006 to 2016.Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2019
    Article
  8. Article
  9. Article
  10. Article
  11. Polarized Entry of Human Parechoviruses in the Airway Epithelium.Frontiers in cellular and infection microbiology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Eveliina KarelehtoDepartment of Medical Microbiology, Laboratory of Clinical Virology, Academic Medical Center, University of Amsterdam, Amsterdam, 1105 AZ, The Netherlands. s.e.karelehto@amc.uva.nl.
Sabine van der SandenDepartment of Medical Microbiology, Laboratory of Clinical Virology, Academic Medical Center, University of Amsterdam, Amsterdam, 1105 AZ, The Netherlands.
James A GeraetsInstitute of Biotechnology & Department of Biosciences, University of Helsinki, Helsinki, 00014, Finland.ORCID 0000-0003-3378-0683
Aušra DomanskaInstitute of Biotechnology & Department of Biosciences, University of Helsinki, Helsinki, 00014, Finland.
Lonneke van der LindenDepartment of Medical Microbiology, Laboratory of Clinical Virology, Academic Medical Center, University of Amsterdam, Amsterdam, 1105 AZ, The Netherlands.ORCID 0000-0003-3273-6728
Dionne HoogendoornDepartment of Medical Microbiology, Laboratory of Clinical Virology, Academic Medical Center, University of Amsterdam, Amsterdam, 1105 AZ, The Netherlands.
Gerrit KoenDepartment of Medical Microbiology, Laboratory of Clinical Virology, Academic Medical Center, University of Amsterdam, Amsterdam, 1105 AZ, The Netherlands.
Hetty van EijkDepartment of Medical Microbiology, Laboratory of Clinical Virology, Academic Medical Center, University of Amsterdam, Amsterdam, 1105 AZ, The Netherlands.
Shabih ShakeelInstitute of Biotechnology & Department of Biosciences, University of Helsinki, Helsinki, 00014, Finland.
Tim BeaumontAIMM Therapeutics, Academic Medical Center, Amsterdam, 1105 AZ, The Netherlands.
Menno de JongDepartment of Medical Microbiology, Laboratory of Clinical Virology, Academic Medical Center, University of Amsterdam, Amsterdam, 1105 AZ, The Netherlands.
Dasja PajkrtDepartment of Pediatric Infectious Diseases, Emma Children's Hospital, Academic Medical Center, Amsterdam, 1105 AZ, The Netherlands.ORCID 0000-0002-5232-8206
Sarah J ButcherInstitute of Biotechnology & Department of Biosciences, University of Helsinki, Helsinki, 00014, Finland.ORCID 0000-0001-7060-5871
Katja C WolthersDepartment of Medical Microbiology, Laboratory of Clinical Virology, Academic Medical Center, University of Amsterdam, Amsterdam, 1105 AZ, The Netherlands.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human parechovirus 3 (HPeV3), a member of the Picornavirus family, is frequently detected worldwide. However, the observed seropositivity rates for HPeV3 neutralizing antibodies (nAbs) vary from high in Japan to low in the Netherlands and Finland. To study if this can be explained by technical differences or antigenic diversity among HPeV3 strains included in the serological studies, we determined the neutralizing activity of Japanese and Dutch intravenous immunoglobulin batches (IVIG), a rabbit HPeV3 hyperimmune polyclonal serum, and a human HPeV3-specific monoclonal antibody (mAb) AT12-015, against the HPeV3 A308/99 prototype strain and clinical isolates from Japan, the Netherlands and Australia, collected between 1989 and 2015. The rabbit antiserum neutralized all HPeV3 isolates whereas the neutralization capacity of the IVIG batches varied, and the mAb exclusively neutralized the A308/99 strain. Mapping of the amino acid variation among a subset of the HPeV3 strains on an HPeV3 capsid structure revealed that the majority of the surface-exposed amino acid variation was located in the VP1. Furthermore, amino acid mutations in a mAb AT12-015-resistant HPeV3 A308/99 variant indicated the location for potential antigenic determinants. Virus aggregation and the observed antigenic diversity in HPeV3 can explain the varying levels of nAb seropositivity reported in previous studies.

Indexed as

Amino Acid SequenceAnimalsAntibodies, NeutralizingAntigenic VariationCapsid ProteinsHumansImmune SeraJapanMutationNetherlandsNeutralization TestsParechovirusPicornaviridae InfectionsRabbitsSequence Homology, Amino AcidSpecies SpecificityAntibodies, NeutralizingCapsid ProteinsImmune Sera

Identifiers

PMID28935894
PMCPMC5608956

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.