Evidence map›Paper›PMID 28935841›Full record

ArticlePlant physiology2017

Light and Plastid Signals Regulate Different Sets of Genes in the Albino Mutant Pap7-1.

Björn Grübler, Livia Merendino, Sven O Twardziok, Morgane Mininno, Guillaume Allorent, Fabien Chevalier, Monique Liebers, Robert Blanvillain, Klaus F X Mayer, Silva Lerbs-Mache and 2 more

Abstract read
In one paragraph

Article in Plant physiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Transformation of Long-Lived AlbinoFrontiers in plant science · 2021
    Article
  15. Article
  16. Article
  17. ThePhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Article
  18. Retrograde signals from mitochondria reprogramme skoto-morphogenesis inPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Björn GrüblerLPCV, CNRS, CEA, INRA, Université Grenoble-Alpes, BIG, 38000, Grenoble, France and.
Livia MerendinoLPCV, CNRS, CEA, INRA, Université Grenoble-Alpes, BIG, 38000, Grenoble, France and.
Sven O TwardziokPlant Genome and Systems Biology, Helmholtz Zentrum München, 85764 Neuherberg, Germany.
Morgane MininnoLPCV, CNRS, CEA, INRA, Université Grenoble-Alpes, BIG, 38000, Grenoble, France and.
Guillaume AllorentLPCV, CNRS, CEA, INRA, Université Grenoble-Alpes, BIG, 38000, Grenoble, France and.
Fabien ChevalierLPCV, CNRS, CEA, INRA, Université Grenoble-Alpes, BIG, 38000, Grenoble, France and.
Monique LiebersLPCV, CNRS, CEA, INRA, Université Grenoble-Alpes, BIG, 38000, Grenoble, France and.
Robert BlanvillainLPCV, CNRS, CEA, INRA, Université Grenoble-Alpes, BIG, 38000, Grenoble, France and.
Klaus F X MayerPlant Genome and Systems Biology, Helmholtz Zentrum München, 85764 Neuherberg, Germany.ORCID http://orcid.org/0000-0001-6484-1077
Silva Lerbs-MacheLPCV, CNRS, CEA, INRA, Université Grenoble-Alpes, BIG, 38000, Grenoble, France and.
Stéphane RavanelLPCV, CNRS, CEA, INRA, Université Grenoble-Alpes, BIG, 38000, Grenoble, France and.
Thomas PfannschmidtLPCV, CNRS, CEA, INRA, Université Grenoble-Alpes, BIG, 38000, Grenoble, France and thomas.pfannschmidt@univ-grenoble-alpes.fr.ORCID http://orcid.org/0000-0002-7532-3467

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plants possessing dysfunctional plastids due to defects in pigment biosynthesis or translation are known to repress photosynthesis-associated nuclear genes via retrograde signals from the disturbed organelles toward the nucleus. These signals are thought to be essential for proper biogenesis and function of the plastid. Mutants lacking plastid-encoded RNA polymerase-associated proteins (PAPs) display a genetic arrest in eoplast-chloroplast transition leading to an albino phenotype in the light. Retrograde signaling in these mutants, therefore, could be expected to be similar as under conditions inducing plastid dysfunction. To answer this question, we performed plastome- and genomewide array analyses in the

Indexed as

Genes, PlantLightSignal TransductionArabidopsisArabidopsis ProteinsChloroplast ProteinsCluster AnalysisGene Expression ProfilingGene Expression Regulation, PlantGene OntologyGene Regulatory NetworksMethyltransferasesModels, BiologicalMorphogenesisMutationPhotosynthesisArabidopsis ProteinsChloroplast ProteinsMethyltransferasespTAC14 protein, ArabidopsisRNA, Messenger

Identifiers

PMID28935841
PMCPMC5664474

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.