Evidence map›Paper›PMID 28935633›Full record

ArticleThe Journal of cell biology2017

Sequence-dependent cargo recognition by SNX-BARs mediates retromer-independent transport of CI-MPR.

Boris Simonetti, Chris M Danson, Kate J Heesom, Peter J Cullen

Open access · bronzeAbstract readVideo-Audio Media
In one paragraph

Article in The Journal of cell biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 127 papers.

0numbers the graph read from it
0cells of the map it votes in
127citing papers in PubMed
11.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

127 citing papers in PubMed, 215 citations in OpenAlex.

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  10. Sorting nexin 5 mediates antigen presentation and immunity againstbioRxiv : the preprint server for biology · 2026
    Article
  11. Determining Lysosomal Enzyme Activity Using Fluorogenic Probes.Methods in molecular biology (Clifton, N.J.) · 2026
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67 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Boris SimonettiSchool of Biochemistry, University of Bristol, Bristol, England, UK.
Chris M DansonSchool of Biochemistry, University of Bristol, Bristol, England, UK.
Kate J HeesomProteomics Facility, School of Biochemistry, University of Bristol, Bristol, England, UK.ORCID 0000-0002-5418-5392
Peter J CullenSchool of Biochemistry, University of Bristol, Bristol, England, UK pete.cullen@bristol.ac.uk.ORCID 0000-0002-9070-8349
University of Bristol · GB

Funding

Medical Research Council MR/P018807/1Wellcome Trust 089928Wellcome Trust 104568
6 · The paper itself

Abstract

Endosomal recycling of transmembrane proteins requires sequence-dependent recognition of motifs present within their intracellular cytosolic domains. In this study, we have reexamined the role of retromer in the sequence-dependent endosome-to-trans-Golgi network (TGN) transport of the cation-independent mannose 6-phosphate receptor (CI-MPR). Although the knockdown or knockout of retromer does not perturb CI-MPR transport, the targeting of the retromer-linked sorting nexin (SNX)-Bin, Amphiphysin, and Rvs (BAR) proteins leads to a pronounced defect in CI-MPR endosome-to-TGN transport. The retromer-linked SNX-BAR proteins comprise heterodimeric combinations of SNX1 or SNX2 with SNX5 or SNX6 and serve to regulate the biogenesis of tubular endosomal sorting profiles. We establish that SNX5 and SNX6 associate with the CI-MPR through recognition of a specific WLM endosome-to-TGN sorting motif. From validating the CI-MPR dependency of SNX1/2-SNX5/6 tubular profile formation, we provide a mechanism for coupling sequence-dependent cargo recognition with the biogenesis of tubular profiles required for endosome-to-TGN transport. Therefore, the data presented in this study reappraise retromer's role in CI-MPR transport.

Indexed as

CRISPR-Cas SystemsEndosomesHeLa CellsHumansNerve Tissue ProteinsProtein BindingProtein Interaction Domains and MotifsProtein TransportReceptor, IGF Type 2Retinal Pigment EpitheliumRNA InterferenceSorting NexinsTime FactorsTransfectiontrans-Golgi Networkamphiphysincation-dependent mannose-6-phosphate receptorNerve Tissue ProteinsReceptor, IGF Type 2SNX1 protein, humanSNX2 protein, humanSNX5 protein, humanSNX6 protein, humanSorting Nexins

Identifiers

PMID28935633
PMCPMC5674890
OpenAlexW2757339705

What OpenQuestion holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.