Evidence map›Paper›PMID 28934947›Full record

ArticleBMC microbiology2017

Milena Lussu, Tania Camboni, Cristina Piras, Corrado Serra, Francesco Del Carratore, Julian Griffin, Luigi Atzori, Aldo Manzin

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 33 citations in OpenAlex.

  1. Metabolites · 2026
    Article
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  3. Article
  4. Review
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  6. Article
  7. Article
  8. Review
  9. Quantitative NMR Methods in Metabolomics.Handbook of experimental pharmacology · 2023
    Article
  10. Review
  11. Article
  12. Review
  13. Short-Chain Fatty Acid and FFAR2 Activation - A New Option for Treating Infections?Frontiers in cellular and infection microbiology · 2021
    Review
  14. Article
  15. NMR-Based Metabolomics.Advances in experimental medicine and biology · 2021
    Article
  16. Review
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Milena LussuDepartment of Biomedical Sciences, Microbiology and Virology Unit, University of Cagliari, S.S. 554, Bivio per Sestu, I-09042, Monserrato, Cagliari, Italy.
Tania CamboniDepartment of Biomedical Sciences, Microbiology and Virology Unit, University of Cagliari, S.S. 554, Bivio per Sestu, I-09042, Monserrato, Cagliari, Italy.
Cristina PirasDepartment of Biomedical Sciences, Microbiology and Virology Unit, University of Cagliari, S.S. 554, Bivio per Sestu, I-09042, Monserrato, Cagliari, Italy.
Corrado SerraDepartment of Medical Sciences and Public Health, University of Cagliari, Cagliari, Italy.
Francesco Del CarratoreDepartment of Biomedical Sciences, Microbiology and Virology Unit, University of Cagliari, S.S. 554, Bivio per Sestu, I-09042, Monserrato, Cagliari, Italy.
Julian GriffinDepartment of Biochemistry, University of Cambridge, Cambridge, UK.
Luigi AtzoriDepartment of Biomedical Sciences, Microbiology and Virology Unit, University of Cagliari, S.S. 554, Bivio per Sestu, I-09042, Monserrato, Cagliari, Italy.
Aldo ManzinDepartment of Biomedical Sciences, Microbiology and Virology Unit, University of Cagliari, S.S. 554, Bivio per Sestu, I-09042, Monserrato, Cagliari, Italy. aldomanzin@medicina.unica.it.ORCID http://orcid.org/0000-0003-2961-3428
University of Cagliari · ITUniversity of Cambridge · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundUrinary tract infection (UTI) is one of the most common diagnoses in girls and women, and to a lesser extent in boys and men younger than 50 years. Escherichia coli, followed by Klebsiella spp. and Proteus spp., cause 75-90% of all infections. Infection of the urinary tract is identified by growth of a significant number of a single species in the urine, in the presence of symptoms. Urinary culture is an accurate diagnostic method but takes several hours or days to be carried out. Metabolomics analysis aims to identify biomarkers that are capable of speeding up diagnosis.

methodsUrine samples from 51 patients with a prior diagnosis of Escherichia coli-associated UTI, from 21 patients with UTI caused by other pathogens (bacteria and fungi), and from 61 healthy controls were analyzed. The

resultsOrthogonal Partial Least Squares-discriminant Analysis (OPLS-DA) showed good separation (R

conclusionsAcetate and trimethylamine were identified as optimal candidates for biomarkers for UTI diagnosis. The conclusions support the possibility of a fast diagnostic test for Escherichia coli-associated UTI using acetate and trimethylamine concentrations.

Indexed as

AcetatesAdultAgedAged, 80 and overBacteriaBacteriuriaBiomarkersEscherichia coliEscherichia coli InfectionsFemaleFungiHumansMaleMetabolomicsMethylaminesMiddle AgedAcetatesBiomarkersMethylaminestrimethylamine1H NMR spectroscopyAcetateE. coliROC curveTrimethylamineUTI

Identifiers

PMID28934947
PMCPMC5609053
OpenAlexW2758874317

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.