Evidence map›Paper›PMID 28934484›Full record

ArticleNucleic acids research2017

Regulation of HuR structure and function by dihydrotanshinone-I.

Preet Lal, Linda Cerofolini, Vito Giuseppe D'Agostino, Chiara Zucal, Carmelo Fuccio, Isabelle Bonomo, Erik Dassi, Stefano Giuntini, Danilo Di Maio, Vikalp Vishwakarma and 18 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 87 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Review
  14. Review
  15. Review
  16. Low Molecular Weight Inhibitors Targeting the RNA-Binding Protein HuR.International journal of molecular sciences · 2023
    Article
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors at 9 institutions in 2 countries.

Preet LalCentre for Integrative Biology, CIBIO, University of Trento, Trento 38122, Italy.
Linda CerofoliniCentre for Magnetic Resonance, CERM, University of Florence, Sesto Fiorentino 50019, Italy.
Vito Giuseppe D'AgostinoCentre for Integrative Biology, CIBIO, University of Trento, Trento 38122, Italy.
Chiara ZucalCentre for Integrative Biology, CIBIO, University of Trento, Trento 38122, Italy.
Carmelo FuccioCentre for Magnetic Resonance, CERM, University of Florence, Sesto Fiorentino 50019, Italy.
Isabelle BonomoCentre for Integrative Biology, CIBIO, University of Trento, Trento 38122, Italy.
Erik DassiCentre for Integrative Biology, CIBIO, University of Trento, Trento 38122, Italy.
Stefano GiuntiniCentre for Magnetic Resonance, CERM, University of Florence, Sesto Fiorentino 50019, Italy.
Danilo Di MaioScuola Normale Superiore, Pisa 56126, Italy.
Vikalp VishwakarmaDepartment of Cancer Biology and University of Kansas Cancer Center, University of Kansas Medical Center, Kansas City, KS 66160, USA.
Ranjan PreetDepartment of Cancer Biology and University of Kansas Cancer Center, University of Kansas Medical Center, Kansas City, KS 66160, USA.
Sha Neisha WilliamsDepartment of Cancer Biology and University of Kansas Cancer Center, University of Kansas Medical Center, Kansas City, KS 66160, USA.
Max S FairlambDepartment of Cancer Biology and University of Kansas Cancer Center, University of Kansas Medical Center, Kansas City, KS 66160, USA.
Rachel MunkNational Institute on Aging, National Institutes of Health, Baltimore, MD 21224, USA.
Elin LehrmannNational Institute on Aging, National Institutes of Health, Baltimore, MD 21224, USA.
Kotb AbdelmohsenNational Institute on Aging, National Institutes of Health, Baltimore, MD 21224, USA.
Saioa R ElezgaraiIstituto di Ricerche Farmacologiche Mario Negri, Milan 20156, Italy.
Claudio LuchinatCentre for Magnetic Resonance, CERM, University of Florence, Sesto Fiorentino 50019, Italy.
Ettore NovellinoDepartment of Pharmacy, University of Naples Federico II, Naples 80138, Italy.
Alessandro QuattroneCentre for Integrative Biology, CIBIO, University of Trento, Trento 38122, Italy.
Emiliano BiasiniCentre for Integrative Biology, CIBIO, University of Trento, Trento 38122, Italy.
Leonardo ManzoniIstituto di Scienze e Tecnologie Molecolari (ISTM), CNR, Milan 20133, Italy.
Myriam GorospeNational Institute on Aging, National Institutes of Health, Baltimore, MD 21224, USA.
Dan A DixonDepartment of Cancer Biology and University of Kansas Cancer Center, University of Kansas Medical Center, Kansas City, KS 66160, USA.
Pierfausto SeneciDipartimento di Chimica, Università degli Studi di Milano, Milan 20133, Italy.
Luciana MarinelliDepartment of Pharmacy, University of Naples Federico II, Naples 80138, Italy.
Marco FragaiCentre for Magnetic Resonance, CERM, University of Florence, Sesto Fiorentino 50019, Italy.
Alessandro ProvenzaniCentre for Integrative Biology, CIBIO, University of Trento, Trento 38122, Italy.
University of Trento · ITInteruniversity Consortium for Magnetic Resonance · ITThe University of Kansas Cancer Center · USNational Institutes of Health · USUniversity of Naples Federico II · ITInstitute of Molecular Science and Technologies · ITMario Negri Institute for Pharmacological Research · ITScuola Normale Superiore · ITUniversity of Milan · IT

Funding

Post-transcriptional Regulation Of Proliferative and Stress Response GenesZIAAG000511 · NIA · NATIONAL INSTITUTE ON AGING · PI GOROSPE, MYRIAM · 2009 to 2025
$25.4M
6 · The paper itself

Abstract

The Human antigen R protein (HuR) is an RNA-binding protein that recognizes U/AU-rich elements in diverse RNAs through two RNA-recognition motifs, RRM1 and RRM2, and post-transcriptionally regulates the fate of target RNAs. The natural product dihydrotanshinone-I (DHTS) prevents the association of HuR and target RNAs in vitro and in cultured cells by interfering with the binding of HuR to RNA. Here, we report the structural determinants of the interaction between DHTS and HuR and the impact of DHTS on HuR binding to target mRNAs transcriptome-wide. NMR titration and Molecular Dynamics simulation identified the residues within RRM1 and RRM2 responsible for the interaction between DHTS and HuR. RNA Electromobility Shifts and Alpha Screen Assays showed that DHTS interacts with HuR through the same binding regions as target RNAs, stabilizing HuR in a locked conformation that hampers RNA binding competitively. HuR ribonucleoprotein immunoprecipitation followed by microarray (RIP-chip) analysis showed that DHTS treatment of HeLa cells paradoxically enriched HuR binding to mRNAs with longer 3'UTR and with higher density of U/AU-rich elements, suggesting that DHTS inhibits the association of HuR to weaker target mRNAs. In vivo, DHTS potently inhibited xenograft tumor growth in a HuR-dependent model without systemic toxicity.

Indexed as

3' Untranslated RegionsAnimalsAntineoplastic Agents, PhytogenicAU Rich ElementsELAV-Like Protein 1FuransHumansMagnetic Resonance SpectroscopyMice, Neurologic MutantsMolecular Dynamics SimulationPhenanthrenesPoint MutationProtein ConformationProtein DomainsQuinonesRNA, Messenger3' Untranslated RegionsAntineoplastic Agents, Phytogenicdihydrotanshinone IELAVL1 protein, humanELAV-Like Protein 1FuransPhenanthrenesQuinonesRNA, Messenger

Identifiers

PMID28934484
PMCPMC5766160
OpenAlexW2734989022

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.