Evidence map›Paper›PMID 28934425›Full record

ArticleThe Journal of infectious diseases2017

Human Bocavirus Capsid Messenger RNA Detection in Children With Pneumonia.

Robert Schlaberg, Krow Ampofo, Keith D Tardif, Chris Stockmann, Keith E Simmon, Weston Hymas, Steven Flygare, Brett Kennedy, Anne Blaschke, Karen Eilbeck and 8 more

Open access · bronzeAbstract readMulticenter Study
In one paragraph

Article in The Journal of infectious diseases, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 32 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Role of Human Bocavirus Respiratory Tract Infection in Hematopoietic Cell Transplant Recipients.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2021
    Article
  9. Article
  10. Article
  11. Article
  12. Comparison of phenotypic and genotypic diagnosis of acute human bocavirus 1 infection in children.Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology · 2019
    Article
  13. Article
  14. Article
  15. Epidemiologic and Clinical Characteristics of Coronavirus and Bocavirus Respiratory Infections after Allogeneic Stem Cell Transplantation: A Prospective Single-Center Study.Biology of blood and marrow transplantation : journal of the American Society for Blood and Marrow Transplantation · 2018
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 9 institutions in 1 country.

Robert SchlabergDepartment of Pathology.
Krow AmpofoDepartments of Pediatrics.
Keith D TardifARUP Institute for Clinical and Experimental Pathology, Salt Lake City, Utah.
Chris StockmannDepartments of Pediatrics.
Keith E SimmonDepartments of Biomedical Informatics.
Weston HymasARUP Institute for Clinical and Experimental Pathology, Salt Lake City, Utah.
Steven FlygareDepartment of Human Genetics, University of Utah.
Brett KennedyDepartment of Human Genetics, University of Utah.
Anne BlaschkeDepartments of Pediatrics.
Karen EilbeckDepartments of Biomedical Informatics.
Mark YandellDepartment of Human Genetics, University of Utah.
Jon A McCullersDepartment of Pediatrics, University of Tennessee Health Sciences Center.
Derek J WilliamsVanderbilt University School of Medicine.
Kathryn EdwardsDivision of Infectious Diseases, Department of Pediatrics, Monroe Carell Jr. Children's Hospital, Vanderbilt University.
Sandra R ArnoldDepartment of Pediatrics, University of Tennessee Health Sciences Center.
Anna BramleyCenters for Disease Control and Prevention, Atlanta, Georgia.
Seema JainCenters for Disease Control and Prevention, Atlanta, Georgia.
Andrew T PaviaDepartments of Pediatrics.
Pediatrics and Genetics · USUniversity of Utah · USARUP Institute for Clinical and Experimental PathologyCenters for Disease Control and Prevention · USARUP Laboratories (United States) · USLe Bonheur Children's Hospital · USUniversity of Tennessee Health Science Center · USVanderbilt Health · USVanderbilt University · US

Funding

TRAINING IN CARDIOVASCULAR RESEARCHT32HL007576 · NHLBI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Stavros George Drakos, Robin M Shaw · 1985 to 2026
$10.6M
Development and Validation of a Clinical Prediction Rule for Pediatric PneumoniaK23AI104779 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI WILLIAMS, DEREK J. · 2013 to 2016
$688k
NHLBI NIH HHS T32 HL007576NIAID NIH HHS K23 AI104779
6 · The paper itself

Abstract

Background: The role of human bocavirus (HBoV) in respiratory illness is uncertain. HBoV genomic DNA is frequently detected in both ill and healthy children. We hypothesized that spliced viral capsid messenger RNA (mRNA) produced during active replication might be a better marker for acute infection. Methods: As part of the Etiology of Pneumonia in the Community (EPIC) study, children aged <18 years who were hospitalized with community-acquired pneumonia (CAP) and children asymptomatic at the time of elective outpatient surgery (controls) were enrolled. Nasopharyngeal/oropharyngeal specimens were tested for HBoV mRNA and genomic DNA by quantitative polymerase chain reaction. Results: HBoV DNA was detected in 10.4% of 1295 patients with CAP and 7.5% of 721 controls (odds ratio [OR], 1.4 [95% confidence interval {CI}, 1.0-2.0]); HBoV mRNA was detected in 2.1% and 0.4%, respectively (OR, 5.1 [95% CI, 1.6-26]). When adjusted for age, enrollment month, and detection of other respiratory viruses, HBoV mRNA detection (adjusted OR, 7.6 [95% CI, 1.5-38.4]) but not DNA (adjusted OR, 1.2 [95% CI, .6-2.4]) was associated with CAP. Among children with no other pathogens detected, HBoV mRNA (OR, 9.6 [95% CI, 1.9-82]) was strongly associated with CAP. Conclusions: Detection of HBoV mRNA but not DNA was associated with CAP, supporting a pathogenic role for HBoV in CAP. HBoV mRNA could be a useful target for diagnostic testing.

Indexed as

Acute DiseaseBocavirusCapsid ProteinsCase-Control StudiesChildChild, PreschoolCommunity-Acquired InfectionsHospitalizationHumansInfantMaleNasopharynxOropharynxParvoviridae InfectionsPneumonia, ViralProspective StudiesCapsid ProteinsRNA, MessengerRNA, Viralasymptomatic sheddingdetectionHuman bocavirusmRNApneumonia

Identifiers

PMID28934425
PMCPMC5853397
OpenAlexW2737277950

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.