Evidence map›Paper›PMID 28933546›Full record

ArticleJournal of medicinal chemistry2017

Rational Design of Selective Adenine-Based Scaffolds for Inactivation of Bacterial Histidine Kinases.

Manibarsha Goswami, Kaelyn E Wilke, Erin E Carlson

Open access · greenAbstract read
In one paragraph

Article in Journal of medicinal chemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Evaluation of Expanded 2-Aminobenzothiazole Library for Inhibition ofbioRxiv : the preprint server for biology · 2024
    Article
  4. Targeting multidrug resistantChemical science · 2023
    Article
  5. Review
  6. Strategies to Attenuate the Competence Regulon inPeptide science (Hoboken, N.J.) · 2021
    Article
  7. Review
  8. Review
  9. Review
  10. Article
  11. Disarming the virulence arsenal ofChemical science · 2018
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Manibarsha GoswamiDepartment of Chemistry, University of Minnesota , 207 Pleasant Street SE, Minneapolis, Minnesota 55454, United States.
Kaelyn E WilkeDepartment of Chemistry, Indiana University , 800 East Kirkwood Avenue, Bloomington, Indiana 47405, United States.
Erin E CarlsonDepartment of Chemistry, University of Minnesota , 207 Pleasant Street SE, Minneapolis, Minnesota 55454, United States.ORCID 0000-0001-8287-8893
University of Minnesota · USIndiana University Bloomington · US

Funding

Targeted natural product diversification to identify novel antibacterial agentsDP2OD008592 · OD · UNIVERSITY OF MINNESOTA · PI CARLSON, ERIN ELIZABETH · 2011 to 2011
$2.2M
NIH HHS DP2 OD008592
6 · The paper itself

Abstract

Bacterial histidine kinases (HKs) are quintessential regulatory enzymes found ubiquitously in bacteria. Apart from their regulatory roles, they are also involved in the production of virulence factors and conferring resistance to various antibiotics in pathogenic microbes. We have previously reported compounds that inhibit multiple HKs by targeting the conserved catalytic and ATP-binding (CA) domain. Herein, we conduct a detailed structure-activity relationship assessment of adenine-based inhibitors using biochemical and docking methods. These studies have resulted in several observations. First, interaction of an inhibitor's amine group with the conserved active-site Asp is essential for activity and likely dictates its orientation in the binding pocket. Second, a N-NH-N triad in the inhibitor scaffold is highly preferred for binding to conserved Gly:Asp:Asn residues. Lastly, hydrophobic electron-withdrawing groups at several positions in the adenine core enhance potency. The selectivity of these inhibitors was tested against heat shock protein 90 (HSP90), which possesses a similar ATP-binding fold. We found that groups that target the ATP-lid portion of the catalytic domain, such as a six-membered ring, confer selectivity for HKs.

Indexed as

AdenineAdenosine TriphosphateAnti-Bacterial AgentsAspartic AcidBacteriaDrug DesignHistidine KinaseHSP90 Heat-Shock ProteinsModels, MolecularMolecular Docking SimulationStructure-Activity RelationshipAdenineAdenosine TriphosphateAnti-Bacterial AgentsAspartic AcidHistidine KinaseHSP90 Heat-Shock Proteins

Identifiers

PMID28933546
PMCPMC5743200
OpenAlexW2759675246

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.