Evidence map›Paper›PMID 28932984›Full record

ArticleWorld journal of microbiology & biotechnology2017

RNAi-mediated down-regulation of a melanin polyketide synthase (pks1) gene in the fungus Slafractonia leguminicola.

Mohammad S Alhawatema, Sayed Gebril, Daniel Cook, Rebecca Creamer

Abstract read
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In one paragraph

Article in World journal of microbiology & biotechnology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. siRNA-Silencing ofFrontiers in microbiology · 2025
    Article
  3. Article
  4. Expanding the Toolbox for Genetic Manipulation inJournal of fungi (Basel, Switzerland) · 2024
    Article
  5. Article
  6. Silencing of the Transmembrane Transporter (Journal of fungi (Basel, Switzerland) · 2023
    Article
  7. Mycoviral gene integration converts a plant pathogenic fungus into a biocontrol agent.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  8. Article
  9. Genetic Relationships in the Toxin-Producing Fungal Endophyte,Journal of fungi (Basel, Switzerland) · 2021
    Article
  10. Article
  11. A comprehensive catalogue of polyketide synthase gene clusters in lichenizing fungi.Journal of industrial microbiology & biotechnology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 3 countries.

Mohammad S AlhawatemaMolecular Biology Graduate Program, New Mexico State University, Las Cruces, NM, 88003, USA.
Sayed GebrilHorticulture Department, Sohag University, Sohag, Egypt.
Daniel CookU.S. Department of Agriculture, Agricultural Research Service, Poisonous Plant Research Laboratory, 1150 East 1400 North, Logan, UT, 84341, USA.
Rebecca CreamerMolecular Biology Graduate Program, New Mexico State University, Las Cruces, NM, 88003, USA. creamer@nmsu.edu.ORCID http://orcid.org/0000-0002-5058-2980
New Mexico State University · USAgricultural Research Service · USSohag University · EG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The fungus Slafractonia leguminicola, the causal agent of blackpatch disease of legumes produces two mycotoxins slaframine and swainsonine, causing slobbers' symptoms and locoism of grazing animals, respectively. The genetics of this important fungus is poorly understood. This work aimed to develop a genetic transformation system and evaluate the efficacy of RNA interference (RNAi) in S. leguminicola. In this study, S. leguminicola was transformed using a PEG-mediated method with a fungal construct that carries a hygromycin resistance cassette. To assess the use of RNAi, a silencing construct pSilentPKS1-AS was constructed which includes inverted repeat transgenes of the polyketide synthase gene (pks1) that is involved in melanin biosynthesis. Transformation of S. leguminicola with the IRT pks1 vector decreased pks1 transcripts levels 82-92% in knockdown mutants when compared with the wild type and was accompanied with a reduction in melanin and swainsonine production. These results demonstrate that RNAi can be a useful tool for studying gene function in S. leguminicola.

Indexed as

Down-RegulationAscomycotaGene Expression Regulation, EnzymologicGene Expression Regulation, FungalGene Knockdown TechniquesMelaninsPolyketide SynthasesRNA InterferenceSwainsonineMelaninsPolyketide SynthasesSwainsonineMelaninPolyketide synthaseRNAiSlafractonia leguminicolaSwainsonineTransformation

Identifiers

PMID28932984
OpenAlexW2756208159

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.