Evidence map›Paper›PMID 28931938›Full record

ArticleScientific reports2017

Dynamic transcriptome and phytohormone profiling along the time of light exposure in the mesocotyl of rice seedling.

Fangjun Feng, Hanwei Mei, Peiqing Fan, Yanan Li, Xiaoyan Xu, Haibin Wei, Ming Yan, Lijun Luo

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 1 pooled it
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 1 synthesis or guideline pooled it, 39 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Fangjun FengShanghai Agrobiological Gene Center; Shanghai Research Station of Crop Gene Resource & Germplasm Enhancement, Chinese Ministry of Agriculture, Shanghai, 201106, China.
Hanwei MeiShanghai Agrobiological Gene Center; Shanghai Research Station of Crop Gene Resource & Germplasm Enhancement, Chinese Ministry of Agriculture, Shanghai, 201106, China.ORCID 0000-0001-6713-3623
Peiqing FanShanghai Agrobiological Gene Center; Shanghai Research Station of Crop Gene Resource & Germplasm Enhancement, Chinese Ministry of Agriculture, Shanghai, 201106, China.
Yanan LiShanghai Agrobiological Gene Center; Shanghai Research Station of Crop Gene Resource & Germplasm Enhancement, Chinese Ministry of Agriculture, Shanghai, 201106, China.
Xiaoyan XuShanghai Agrobiological Gene Center; Shanghai Research Station of Crop Gene Resource & Germplasm Enhancement, Chinese Ministry of Agriculture, Shanghai, 201106, China.
Haibin WeiShanghai Agrobiological Gene Center; Shanghai Research Station of Crop Gene Resource & Germplasm Enhancement, Chinese Ministry of Agriculture, Shanghai, 201106, China.
Ming YanShanghai Agrobiological Gene Center; Shanghai Research Station of Crop Gene Resource & Germplasm Enhancement, Chinese Ministry of Agriculture, Shanghai, 201106, China. myan@sagc.org.cn.
Lijun LuoShanghai Agrobiological Gene Center; Shanghai Research Station of Crop Gene Resource & Germplasm Enhancement, Chinese Ministry of Agriculture, Shanghai, 201106, China. lijun@sagc.org.cn.
Shanghai Agrobiological Gene Center · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mesocotyl elongation is an important trait influencing seedling emergence and establishment in rice direct-seeding cultivation and is immediately inhibited after light exposure. Detailed researches on the molecular basis and biological processes underlying light repression of mesocotyl growth could probably provide useful information for key factors controlling this trait. Here we monitored the transcriptome and endogenous phytohormone changes specifically in the elongating mesocotyl in response to light exposure with a time-course. It was revealed that 974 transcripts were significantly differentially expressed (FDR < 0.05, |log

Indexed as

Gene Expression ProfilingLightOryzaPlant Growth RegulatorsSeedlingsTime FactorsPlant Growth Regulators

Identifiers

PMID28931938
PMCPMC5607350
OpenAlexW2755345447

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.