Evidence map›Paper›PMID 28931158›Full record

ArticleJournal of insect science (Online)2017

New Mitogenomes of Two Chinese Stag Beetles (Coleoptera, Lucanidae) and Their Implications for Systematics.

Zi-Qi Lin, Fan Song, Teng Li, Yuan-Yuan Wu, Xia Wan

Abstract read
In one paragraph

Article in Journal of insect science (Online), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. The first complete mitochondrial genome of the genusMitochondrial DNA. Part B, Resources · 2024
    Article
  6. Article
  7. Characterization of the complete mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2021
    Article
  8. Article
  9. Characterisation of the complete mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2019
    Article
  10. Article
  11. Article
  12. Article
  13. The mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2018
    Article
  14. The mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Zi-Qi LinDepartment of Ecology, School of Resources and Engineering, Anhui University, 111 Jiulong Rd., Hefei 230601, P. R. China.
Fan SongDepartment of Entomology, China Agricultural University, West Campus, 2 Yuanmingyuan West Rd., Beijing 100193, P. R. China.
Teng LiDepartment of Zoology and Developmental Biology, School of Life Sciences, Lanzhou University, 222 Tianshui South Rd., Lanzhou 730000, P. R. China.
Yuan-Yuan WuDepartment of Ecology, School of Resources and Engineering, Anhui University, 111 Jiulong Rd., Hefei 230601, P. R. China.
Xia WanDepartment of Ecology, School of Resources and Engineering, Anhui University, 111 Jiulong Rd., Hefei 230601, P. R. China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although conspicuous and well-studied, stag beetles have been slow to join the genomic era. In this study, mitochondrial genomes of two stag beetles, Sinodendron yunnanense and Prosopocoilus confucius, are sequenced for the first time. Both of their genomes consisted of 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), 2 ribosomal RNAs (rRNAs), and a control region. The mitogenome of S. yunnanense was 16,921 bp in length, and P. confucius was 16,951 bp. The location of the gene trnL(UUR), between the A + T-rich and control region in S. yunnanense, is the first observed in Lucanidae. In P. confucius, an unexpected noncoding region of 580 bp was discovered. Maximum likelihood and Bayesian inference on the 13 mitochondrial PCGs were used to infer the phylogenetic relationships among 12 representative stag beetles and three scarab beetles. The topology of the two phylogenetic trees was almost identical: S. yunnanense was recovered as the most basal Lucanid, and the genus Prosopocoilus was polyphyletic due to P. gracilis being recovered sister to the genera Dorcus and Hemisodorcus. The phylogenetic results, genetic distances and mitogenomic characteristics call into question the cohesion of the genus Prosopocoilus. The genetic resources and findings herein attempts to redress understudied systematics and mitogenomics of the stag beetles.

Indexed as

Genome, InsectGenome, MitochondrialPhylogenyAnimalsColeopteraSequence Analysis, DNAChinese stag beetlesgene rearrangementmitogenomesnoncoding regionphylogenomics

Identifiers

PMID28931158
PMCPMC5469381

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.