Evidence map›Paper›PMID 28928439›Full record

ArticleScientific reports2017

Polymorphisms in MICA, but not in DEPDC5, HCP5 or PNPLA3, are associated with chronic hepatitis C-related hepatocellular carcinoma.

Hoang Hai, Akihiro Tamori, Le Thi Thanh Thuy, Kanako Yoshida, Atsushi Hagihara, Etsushi Kawamura, Sawako Uchida-Kobayashi, Hiroyasu Morikawa, Masaru Enomoto, Yoshiki Murakami and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 4 pooled it
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 4 syntheses or guidelines pooled it, 37 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Review
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. HCV and tumor-initiating stem-like cells.Frontiers in physiology · 2022
    Review
  12. Article
  13. Review
  14. Omics-derived hepatocellular carcinoma risk biomarkers for precision care of chronic liver diseases.Hepatology research : the official journal of the Japan Society of Hepatology · 2020
    Review
  15. Interplay ofGastroenterology research and practice · 2020
    Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Hoang HaiDepartment of Hepatology, Osaka City University Graduate School of Medicine, Osaka, Japan.
Akihiro TamoriDepartment of Hepatology, Osaka City University Graduate School of Medicine, Osaka, Japan. atamori@med.osaka-cu.ac.jp.
Le Thi Thanh ThuyDepartment of Hepatology, Osaka City University Graduate School of Medicine, Osaka, Japan.
Kanako YoshidaDepartment of Hepatology, Osaka City University Graduate School of Medicine, Osaka, Japan.
Atsushi HagiharaDepartment of Hepatology, Osaka City University Graduate School of Medicine, Osaka, Japan.
Etsushi KawamuraDepartment of Hepatology, Osaka City University Graduate School of Medicine, Osaka, Japan.
Sawako Uchida-KobayashiDepartment of Hepatology, Osaka City University Graduate School of Medicine, Osaka, Japan.
Hiroyasu MorikawaDepartment of Hepatology, Osaka City University Graduate School of Medicine, Osaka, Japan.
Masaru EnomotoDepartment of Hepatology, Osaka City University Graduate School of Medicine, Osaka, Japan.
Yoshiki MurakamiDepartment of Hepatology, Osaka City University Graduate School of Medicine, Osaka, Japan.
Norifumi KawadaDepartment of Hepatology, Osaka City University Graduate School of Medicine, Osaka, Japan.
Osaka City University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recently, the MICA rs2596542 and DEPDC5 rs1012068 variants in Japanese individuals as well as the HCP5 rs2244546 and PNPLA3 rs738409 variants in European individuals have been found associated with hepatocellular carcinoma (HCC). The present study determined which single nucleotide polymorphism (SNP) is the most predictive for developing hepatitis C virus (HCV)-related HCC in a Japanese cohort. Of the 4 SNPs analysed, only the MICA genotypes were significantly associated with development of HCC (p = 0.0185). The major (MA), hetero (HE), and minor (MI) genotypes occurred in 40%, 41%, and 19% of HCC patients and in 43%, 47%, and 10% of non-HCC patients, respectively. Interestingly, the MICA genotype was significantly correlated with MICA mRNA and soluble protein levels. In patients older than 70 years, the MI genotype was significantly associated with HCC development. In addition, the MI genotype was related to HCC development when the platelet count range was 10-15 × 10

Indexed as

Polymorphism, Single NucleotideAcyltransferasesAgedCarcinoma, HepatocellularCohort StudiesFemaleGenetic Predisposition to DiseaseGenotypeGTPase-Activating ProteinsHepatitis C, ChronicHistocompatibility Antigens Class IHumansJapanLipaseLiver NeoplasmsMaleAcyltransferasesDEPDC5 protein, humanGTPase-Activating ProteinsHCP5 long noncoding RNA, humanHistocompatibility Antigens Class ILipaseMembrane ProteinsMHC class I-related chain APhospholipases A2, Calcium-IndependentPNPLA3 protein, humanRepressor ProteinsRNA, Long Noncoding

Identifiers

PMID28928439
PMCPMC5605683
OpenAlexW2756058909

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.