Evidence map›Paper›PMID 28928132›Full record

ArticleThe Journal of cell biology2017

SecA mediates cotranslational targeting and translocation of an inner membrane protein.

Shuai Wang, Chien-I Yang, Shu-Ou Shan

Abstract read
In one paragraph

Article in The Journal of cell biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. The mechanisms of integral membrane protein biogenesis.Nature reviews. Molecular cell biology · 2022
    Review
  10. Review
  11. Article
  12. Redefining Molecular Chaperones as Chaotropes.Frontiers in molecular biosciences · 2021
    Review
  13. Computational prediction of secreted proteins in gram-negative bacteria.Computational and structural biotechnology journal · 2021
    Review
  14. Review
  15. The Dynamic SecYEG Translocon.Frontiers in molecular biosciences · 2021
    Review
  16. Article
  17. Article
  18. Article
  19. Translational Control of Secretory Proteins in Health and Disease.International journal of molecular sciences · 2020
    Review
  20. Timing and specificity of cotranslational nascent protein modification in bacteria.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Shuai WangDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA.ORCID 0000-0002-8920-969X
Chien-I YangDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA.
Shu-Ou ShanDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA sshan@caltech.edu.ORCID 0000-0002-6526-1733

Funding

Molecular Mechanism of Protein Targeting by the Signal Recognition ParticleR01GM078024 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI SHAN, SHU-OU · 2007 to 2020
$4.4M
Molecular mechanisms of post-translational targeting of tail-anchored proteins.R01GM107368 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI SHAN, SHU-OU · 2014 to 2019
$2.1M
NIGMS NIH HHS R01 GM078024NIGMS NIH HHS R01 GM107368
6 · The paper itself

Abstract

Protein targeting to the bacterial plasma membrane was generally thought to occur via two major pathways: cotranslational targeting by signal recognition particle (SRP) and posttranslational targeting by SecA and SecB. Recently, SecA was found to also bind ribosomes near the nascent polypeptide exit tunnel, but the function of this SecA-ribosome contact remains unclear. In this study, we show that SecA cotranslationally recognizes the nascent chain of an inner membrane protein, RodZ, with high affinity and specificity. In vitro reconstitution and in vivo targeting assays show that SecA is necessary and sufficient to direct the targeting and translocation of RodZ to the bacterial plasma membrane in an obligatorily cotranslational mechanism. Sequence elements upstream and downstream of the RodZ transmembrane domain dictate nascent polypeptide selection by SecA instead of the SRP machinery. These findings identify a new route for the targeting of inner membrane proteins in bacteria and highlight the diversity of targeting pathways that enables an organism to accommodate diverse nascent proteins.

Indexed as

Adenosine TriphosphatasesBacterial ProteinsCell MembraneCytoskeletal ProteinsEscherichia coliEscherichia coli ProteinsGene Expression Regulation, BacterialIntracellular MembranesModels, MolecularMutationProtein BindingProtein DomainsProtein Structure, QuaternaryProtein TransportSecA ProteinsSEC Translocation ChannelsAdenosine TriphosphatasesBacterial ProteinsCytoskeletal ProteinsEscherichia coli ProteinsRodZ protein, E coliSecA ProteinsSEC Translocation ChannelsSignal Recognition Particle

Identifiers

PMID28928132
PMCPMC5674894

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.