Evidence map›Paper›PMID 28925024›Full record

ArticleMicrobiologyOpen2017

Complete characterization of new isolates of Neptunomonas phycophila leads to emend its description and opens possibilities of biotechnological applications.

Ana L Diéguez, Phillip Pichon, Sabela Balboa, Thorolf Magnesen, Jesús L Romalde

Open access · goldAbstract read
In one paragraph

Article in MicrobiologyOpen, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Ana L DiéguezDepartamento de Microbiología y Parasitología, CIBUS-Facultad de Biología, Universidade de Santiago, Santiago de Compostela, Spain.
Phillip PichonInstitute of Marine Sciences, School of Biological Sciences, University of Portsmouth, Portsmouth, UK.
Sabela BalboaDepartamento de Microbiología y Parasitología, CIBUS-Facultad de Biología, Universidade de Santiago, Santiago de Compostela, Spain.
Thorolf MagnesenDepartment of Biology, Faculty of Mathematics and Natural Sciences, University of Bergen, Bergen, Norway.
Jesús L RomaldeDepartamento de Microbiología y Parasitología, CIBUS-Facultad de Biología, Universidade de Santiago, Santiago de Compostela, Spain.ORCID 0000-0003-4786-4773
Universidade de Santiago de Compostela · ESUniversity of Bergen · NOUniversity of Portsmouth · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Five strains were isolated from gonad of Great scallop (Pecten maximus) broodstock in a Norwegian hatchery. The study of 16S rRNA gene sequences showed that these isolates belong to Neptunomonas phycophila, a bacterium originally isolated from a symbiont of the anemone Aiptasia tagetes from Puerto Rico. The gyrB and rpoB genes sequences confirmed the affiliation of the scallop isolates to this species. Phenotypic characterization was performed and some differences between the Norwegian isolates and the type strain of N. phycophila were detected, such as ranges of temperature, pH, and tolerance to salinity or the use of several substrates as sole carbon source which lead to an emended description of the species. The strain 3CM2.5 showed phosphatidylethanolamine and phosphatidylglycerol as the major polar lipids. The whole genomes of the scallop strain 3CM2.5 and type strain of the species CECT 8716

Indexed as

AnimalsBacterial Typing TechniquesBase CompositionBiotechnologyDNA, BacterialFatty AcidsGenome, BacterialGonadsNorwayOceanospirillaceaePectinidaePhosphatidylethanolaminesPhylogenyDNA, BacterialFatty AcidsphosphatidylethanolaminePhosphatidylethanolaminesaromatic compounds degradationmicrobiotaNeptunomonas phycophilaPecten maximusWGS

Identifiers

PMID28925024
PMCPMC5727359
OpenAlexW2754359540

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.